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ZNF131 zinc finger protein 131 [ Corvus cornix cornix ]

Gene ID: 104686639, updated on 3-Aug-2024

Summary

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Gene symbol
ZNF131
Gene description
zinc finger protein 131
See related
EnsemblRapid:ENSCCCG00025010230
Gene type
protein coding
RefSeq status
MODEL
Organism
Corvus cornix cornix (sub-species: cornix)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Corvoidea; Corvidae; Corvus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Z
Exon count:
9
Annotation release Status Assembly Chr Location
104 current ASM73873v5 (GCF_000738735.5) Z NC_046357.1 (10030136..10046850, complement)
101 previous assembly Hooded_Crow_genome (GCF_000738735.1) Unplaced Scaffold NW_010959331.1 (6340878..6356995)

Chromosome Z - NC_046357.1Genomic Context describing neighboring genes Neighboring gene 3-hydroxy-3-methylglutaryl-CoA synthase 1 Neighboring gene NIM1 serine/threonine protein kinase Neighboring gene selenoprotein P Neighboring gene coiled-coil domain containing 152 Neighboring gene growth hormone receptor

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
zinc finger protein 131

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Corvus cornix cornix Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM73873v5 Primary Assembly

Genomic

  1. NC_046357.1 Reference ASM73873v5 Primary Assembly

    Range
    10030136..10046850 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_039567735.1 → XP_039423669.1  zinc finger protein 131 isoform X2

    Conserved Domains (3) summary
    sd00017
    Location:292 → 313
    ZF_C2H2; C2H2 Zn finger [structural motif]
    cd18221
    Location:16 → 128
    BTB_POZ_ZBTB35_ZNF131; BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ (poxvirus and zinc finger) domain found in zinc finger protein 131 (ZNF131)
    pfam13465
    Location:344 → 369
    zf-H2C2_2; Zinc-finger double domain

  2. XM_010395219.4 → XP_010393521.1  zinc finger protein 131 isoform X1

    Related
    ENSCCCP00025017802.1, ENSCCCT00025021102.1
    Conserved Domains (4) summary
    smart00225
    Location:48 → 142
    BTB; Broad-Complex, Tramtrack and Bric a brac
    sd00017
    Location:305 → 326
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam00651
    Location:37 → 135
    BTB; BTB/POZ domain
    pfam13465
    Location:357 → 382
    zf-H2C2_2; Zinc-finger double domain

  3. XM_010395221.4 → XP_010393523.1  zinc finger protein 131 isoform X2

    See identical proteins and their annotated locations for XP_010393523.1

    Related
    ENSCCCP00025017790.1, ENSCCCT00025021088.1
    Conserved Domains (3) summary
    sd00017
    Location:292 → 313
    ZF_C2H2; C2H2 Zn finger [structural motif]
    cd18221
    Location:16 → 128
    BTB_POZ_ZBTB35_ZNF131; BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ (poxvirus and zinc finger) domain found in zinc finger protein 131 (ZNF131)
    pfam13465
    Location:344 → 369
    zf-H2C2_2; Zinc-finger double domain

  4. XM_019283324.3 → XP_019138869.1  zinc finger protein 131 isoform X2

    Conserved Domains (3) summary
    sd00017
    Location:292 → 313
    ZF_C2H2; C2H2 Zn finger [structural motif]
    cd18221
    Location:16 → 128
    BTB_POZ_ZBTB35_ZNF131; BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ (poxvirus and zinc finger) domain found in zinc finger protein 131 (ZNF131)
    pfam13465
    Location:344 → 369
    zf-H2C2_2; Zinc-finger double domain

  5. XM_010395222.4 → XP_010393524.1  zinc finger protein 131 isoform X3

    Related
    ENSCCCP00025017807.1, ENSCCCT00025021109.1
    Conserved Domains (4) summary
    smart00225
    Location:48 → 142
    BTB; Broad-Complex, Tramtrack and Bric a brac
    sd00017
    Location:271 → 292
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam00651
    Location:37 → 135
    BTB; BTB/POZ domain
    pfam13465
    Location:323 → 348
    zf-H2C2_2; Zinc-finger double domain

  6. XM_039567734.1 → XP_039423668.1  zinc finger protein 131 isoform X2

    Conserved Domains (3) summary
    sd00017
    Location:292 → 313
    ZF_C2H2; C2H2 Zn finger [structural motif]
    cd18221
    Location:16 → 128
    BTB_POZ_ZBTB35_ZNF131; BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ (poxvirus and zinc finger) domain found in zinc finger protein 131 (ZNF131)
    pfam13465
    Location:344 → 369
    zf-H2C2_2; Zinc-finger double domain

  7. XM_019283325.3 → XP_019138870.1  zinc finger protein 131 isoform X4

Nucleotide Protein
Heading Accession and Version

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