U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

TRAF6 TNF receptor associated factor 6 [ Rhinopithecus roxellana (golden snub-nosed monkey) ]

Gene ID: 104658364, updated on 12-Mar-2024

Summary

Go to the top of the page Help
Gene symbol
TRAF6
Gene description
TNF receptor associated factor 6
See related
Ensembl:ENSRROG00000042849
Gene type
protein coding
RefSeq status
MODEL
Organism
Rhinopithecus roxellana
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Colobinae; Rhinopithecus
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
Location:
chromosome: 15
Exon count:
7
Annotation release Status Assembly Chr Location
101 current ASM756505v1 (GCF_007565055.1) 15 NC_044563.1 (107852599..107875647)
100 previous assembly Rrox_v1 (GCF_000769185.1) Unplaced Scaffold NW_010830541.1 (6226307..6252785, complement)

Chromosome 15 - NC_044563.1Genomic Context describing neighboring genes Neighboring gene intraflagellar transport associated protein Neighboring gene recombination activating 2 Neighboring gene recombination activating 1 Neighboring gene proline rich 5 like Neighboring gene COMM domain containing 9

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables tumor necrosis factor receptor binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ubiquitin protein ligase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in interleukin-1-mediated signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of JNK cascade IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of NF-kappaB transcription factor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein K63-linked ubiquitination IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of apoptotic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of canonical NF-kappaB signal transduction IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in tumor necrosis factor-mediated signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of plasma membrane signaling receptor complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
LOW QUALITY PROTEIN: TNF receptor-associated factor 6

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Rhinopithecus roxellana Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM756505v1 Primary Assembly

Genomic

  1. NC_044563.1 Reference ASM756505v1 Primary Assembly

    Range
    107852599..107875647
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_010358403.2 → XP_010356705.2  LOW QUALITY PROTEIN: TNF receptor-associated factor 6

    Conserved Domains (5) summary
    PRK04778
    Location:287 → 348
    PRK04778; septation ring formation regulator EzrA; Provisional
    cd03776
    Location:351 → 500
    MATH_TRAF6; Tumor Necrosis Factor Receptor (TNFR)-Associated Factor (TRAF) family, TRAF6 subfamily, TRAF domain, C-terminal MATH subdomain; composed of proteins with similarity to human TRAF6, including the Drosophila protein DTRAF2. TRAF molecules serve as adapter ...
    pfam02176
    Location:204 → 261
    zf-TRAF; TRAF-type zinc finger
    cd16643
    Location:67 → 124
    mRING-HC-C3HC3D_TRAF6; Modified RING finger, HC subclass (C3HC3D-type), found in tumor necrosis factor (TNF) receptor-associated factor 6 (TRAF6) and similar proteins
    pfam18048
    Location:157 → 183
    TRAF6_Z2; TNF receptor-associated factor 6 zinc finger 2
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.