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ZC3H7B zinc finger CCCH-type containing 7B [ Phaethon lepturus (White-tailed tropicbird) ]

Gene ID: 104625002, updated on 3-Aug-2024

Summary

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Gene symbol
ZC3H7B
Gene description
zinc finger CCCH-type containing 7B
Locus tag
N335_06402
Gene type
protein coding
RefSeq status
MODEL
Organism
Phaethon lepturus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Phaethontimorphae; Phaethontiformes; Phaethontidae; Phaethon
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
22
Annotation release Status Assembly Chr Location
100 current ASM68728v1 (GCF_000687285.1) Unplaced Scaffold NW_010556676.1 (16484..56012, complement)

NW_010556676.1Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_010556676.1 Unplaced Scaffold Reference ASM68728v1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables metal ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables miRNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in miRNA processing IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
zinc finger CCCH domain-containing protein 7B
Names
Zinc finger CCCH domain-containing protein 7B

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Phaethon lepturus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM68728v1

Genomic

  1. NW_010556676.1 Reference ASM68728v1

    Range
    16484..56012 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_010292520.1 → XP_010290822.1  zinc finger CCCH domain-containing protein 7B

    UniProtKB/TrEMBL
    A0A091TQD3
    Conserved Domains (7) summary
    sd00020
    Location:897 → 919
    ZF_C2H2; C2H2 Zn finger [structural motif]
    sd00006
    Location:39 → 64
    TPR; TPR repeat [structural motif]
    pfam00515
    Location:83 → 115
    TPR_1; Tetratricopeptide repeat
    pfam00642
    Location:944 → 966
    zf-CCCH; Zinc finger C-x8-C-x5-C-x3-H type (and similar)
    pfam12171
    Location:897 → 920
    zf-C2H2_jaz; Zinc-finger double-stranded RNA-binding
    pfam13414
    Location:37 → 113
    TPR_11; TPR repeat
    pfam14559
    Location:92 → 163
    TPR_19; Tetratricopeptide repeat
Nucleotide Protein
Heading Accession and Version

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