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ITSN2 intersectin 2 [ Tinamus guttatus (white-throated tinamou) ]

Gene ID: 104569564, updated on 12-Mar-2024

Summary

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Gene symbol
ITSN2
Gene description
intersectin 2
Gene type
protein coding
RefSeq status
MODEL
Organism
Tinamus guttatus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Palaeognathae; Tinamiformes; Tinamidae; Tinamus
Annotation information
Annotation category: partial on reference assembly
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
13
Annotation release Status Assembly Chr Location
100 current ASM70537v2 (GCF_000705375.1) Unplaced Scaffold NW_010576916.1 (4393..23102, complement)

NW_010576916.1Genomic Context describing neighboring genes Neighboring gene family with sequence similarity 228 member B

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_010576916.1 Unplaced Scaffold Reference ASM70537v2

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables guanyl-nucleotide exchange factor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in positive regulation of Rho protein signal transduction IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
intersectin-2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Tinamus guttatus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM70537v2

Genomic

  1. NW_010576916.1 Reference ASM70537v2

    Range
    4393..23102 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_010216542.1 → XP_010214844.1  intersectin-2

    Conserved Domains (6) summary
    cd08375
    Location:458 → 592
    C2_Intersectin; C2 domain present in Intersectin
    cd11996
    Location:34 → 87
    SH3_Intersectin2_5; Fifth Src homology 3 domain (or SH3E) of Intersectin-2
    cd13264
    Location:324 → 455
    PH_ITSN; Intersectin Pleckstrin homology (PH) domain
    pfam00169
    Location:339 → 447
    PH; PH domain
    pfam00621
    Location:118 → 298
    RhoGEF; RhoGEF domain
    cl17036
    Location:1 → 19
    SH3; Src Homology 3 domain superfamily
Nucleotide Protein
Heading Accession and Version

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