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NEDD4L NEDD4 like E3 ubiquitin protein ligase [ Colius striatus (speckled mousebird) ]

Gene ID: 104560225, updated on 3-Aug-2024

Summary

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Gene symbol
NEDD4L
Gene description
NEDD4 like E3 ubiquitin protein ligase
Locus tag
N325_09980
Gene type
protein coding
RefSeq status
MODEL
Organism
Colius striatus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Coraciimorphae; Coliiformes; Coliidae; Colius
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Z
Exon count:
32
Annotation release Status Assembly Chr Location
RS_2023_12 current bColStr4.1.hap1 (GCF_028858725.1) Z NC_084790.1 (88336485..88526611)
100 previous assembly ASM69071v1 (GCF_000690715.1) Unplaced Scaffold NW_010703176.1 (14594..58256)

Chromosome Z - NC_084790.1Genomic Context describing neighboring genes Neighboring gene asparaginyl-tRNA synthetase 1 Neighboring gene ATPase phospholipid transporting 8B1 Neighboring gene uncharacterized LOC133628825 Neighboring gene alpha kinase 2 Neighboring gene MALT1 paracaspase

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables sodium channel inhibitor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ubiquitin protein ligase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in negative regulation of sodium ion transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of dendrite morphogenesis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in ubiquitin-dependent protein catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
E3 ubiquitin-protein ligase NEDD4-like
Names
neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_028858725.1-RS_2023_12

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bColStr4.1.hap1 Primary Assembly

Genomic

  1. NC_084790.1 Reference bColStr4.1.hap1 Primary Assembly

    Range
    88336485..88526611
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_062019381.1 → XP_061875365.1  E3 ubiquitin-protein ligase NEDD4-like isoform X4

  2. XM_062019380.1 → XP_061875364.1  E3 ubiquitin-protein ligase NEDD4-like isoform X3

  3. XM_062019378.1 → XP_061875362.1  E3 ubiquitin-protein ligase NEDD4-like isoform X1

  4. XM_062019379.1 → XP_061875363.1  E3 ubiquitin-protein ligase NEDD4-like isoform X2

Nucleotide Protein
Heading Accession and Version

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