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FTO FTO alpha-ketoglutarate dependent dioxygenase [ Chaetura pelagica (chimney swift) ]

Gene ID: 104388589, updated on 3-Aug-2024

Summary

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Gene symbol
FTO
Gene description
FTO alpha-ketoglutarate dependent dioxygenase
Locus tag
M959_09697
Gene type
protein coding
RefSeq status
MODEL
Organism
Chaetura pelagica
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Strisores; Apodiformes; Apodidae; Apodinae; Chaetura
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
8
Annotation release Status Assembly Chr Location
100 current ChaPel_1.0 (GCF_000747805.1) Unplaced Scaffold NW_009953205.1 (1246187..1432502, complement)

NW_009953205.1Genomic Context describing neighboring genes Neighboring gene matrix metallopeptidase 2 Neighboring gene iroquois homeobox 3 Neighboring gene RPGRIP1 like Neighboring gene AKT interacting protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_009953205.1 Unplaced Scaffold Reference ChaPel_1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables broad specificity oxidative DNA demethylase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ferrous iron binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables mRNA N6-methyladenosine dioxygenase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in DNA alkylation repair IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in RNA repair IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of multicellular organism growth IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
alpha-ketoglutarate-dependent dioxygenase FTO
Names
Alpha-ketoglutarate-dependent dioxygenase FTO

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Chaetura pelagica Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ChaPel_1.0

Genomic

  1. NW_009953205.1 Reference ChaPel_1.0

    Range
    1246187..1432502 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_009997471.1 → XP_009995773.1  alpha-ketoglutarate-dependent dioxygenase FTO

    Conserved Domains (2) summary
    pfam12933
    Location:6 → 307
    FTO_NTD; FTO catalytic domain
    pfam12934
    Location:311 → 479
    FTO_CTD; FTO C-terminal domain
Nucleotide Protein
Heading Accession and Version

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