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VSNL1 visinin like 1 [ Tauraco erythrolophus (red-crested turaco) ]

Gene ID: 104382178, updated on 3-Aug-2024

Summary

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Gene symbol
VSNL1
Gene description
visinin like 1
Locus tag
N340_01509
Gene type
protein coding
RefSeq status
MODEL
Organism
Tauraco erythrolophus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Otidimorphae; Musophagiformes; Musophagidae; Tauraco
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
3
Annotation release Status Assembly Chr Location
100 current ASM70936v1 (GCF_000709365.1) Unplaced Scaffold NW_010076863.1 (38980..90504)

NW_010076863.1Genomic Context describing neighboring genes Neighboring gene structural maintenance of chromosomes 6

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_010076863.1 Unplaced Scaffold Reference ASM70936v1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables calcium ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
visinin-like protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Tauraco erythrolophus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM70936v1

Genomic

  1. NW_010076863.1 Reference ASM70936v1

    Range
    38980..90504
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_009990068.1 → XP_009988370.1  visinin-like protein 1 isoform X1

    See identical proteins and their annotated locations for XP_009988370.1

    UniProtKB/TrEMBL
    A0A093F0J8
    Conserved Domains (1) summary
    COG5126
    Location:15 → 181
    FRQ1; Ca2+-binding protein, EF-hand superfamily [Signal transduction mechanisms]

  2. XM_009990069.1 → XP_009988371.1  visinin-like protein 1 isoform X2

    See identical proteins and their annotated locations for XP_009988371.1

    Conserved Domains (1) summary
    cl08302
    Location:40 → 104
    EFh; EF-hand, calcium binding motif; A diverse superfamily of calcium sensors and calcium signal modulators; most examples in this alignment model have 2 active canonical EF hands. Ca2+ binding induces a conformational change in the EF-hand motif, leading to ...
Nucleotide Protein
Heading Accession and Version

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