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AKIRIN2 akirin 2 [ Tyto alba (common barn owl) ]

Gene ID: 104368877, updated on 3-Aug-2024

Summary

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Gene symbol
AKIRIN2
Gene description
akirin 2
Locus tag
N341_08835
Gene type
protein coding
RefSeq status
MODEL
Organism
Tyto alba
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Strigiformes; Tytonidae; Tyto
Also known as
Akirin-2
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
6
Annotation release Status Assembly Chr Location
102 current T.alba_DEE_v4.0 (GCF_018691265.1) Unplaced Scaffold NW_024881316.1 (11245712..11263055)
100 previous assembly ASM68720v1 (GCF_000687205.1) Unplaced Scaffold NW_009979907.1 (10274..16076)

NW_024881316.1Genomic Context describing neighboring genes Neighboring gene sperm acrosome associated 1 Neighboring gene uncharacterized LOC116964121 Neighboring gene origin recognition complex subunit 3 Neighboring gene arginyl-tRNA synthetase 2, mitochondrial

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables transcription coregulator activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in positive regulation of innate immune response IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of chromatin IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
akirin-2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Tyto alba Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference T.alba_DEE_v4.0

Genomic

  1. NW_024881316.1 Reference T.alba_DEE_v4.0

    Range
    11245712..11263055
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_042803256.1 → XP_042659190.1  akirin-2 isoform X3

  2. XM_042803254.1 → XP_042659188.1  akirin-2 isoform X1

  3. XM_042803255.1 → XP_042659189.1  akirin-2 isoform X2

    Conserved Domains (1) summary
    cd22244
    Location:2 → 193
    akirin-2

  4. XM_042803257.1 → XP_042659191.1  akirin-2 isoform X4

    Conserved Domains (1) summary
    cd22244
    Location:2 → 188
    akirin-2
Nucleotide Protein
Heading Accession and Version

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