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ZC3H6 zinc finger CCCH-type containing 6 [ Tyto alba (common barn owl) ]

Gene ID: 104361205, updated on 3-Aug-2024

Summary

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Gene symbol
ZC3H6
Gene description
zinc finger CCCH-type containing 6
Gene type
protein coding
RefSeq status
MODEL
Organism
Tyto alba
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Strigiformes; Tytonidae; Tyto
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
12
Annotation release Status Assembly Chr Location
102 current T.alba_DEE_v4.0 (GCF_018691265.1) Unplaced Scaffold NW_024881278.1 (8222111..8251436)
100 previous assembly ASM68720v1 (GCF_000687205.1) Unplaced Scaffold NW_009999947.1 (11212..28096, complement)

NW_024881278.1Genomic Context describing neighboring genes Neighboring gene MER proto-oncogene, tyrosine kinase Neighboring gene fibulin 7 Neighboring gene uncharacterized LOC122153183 Neighboring gene uncharacterized LOC116960783 Neighboring gene NSF attachment protein beta

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables RNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables metal ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in negative regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
zinc finger CCCH domain-containing protein 6

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Tyto alba Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference T.alba_DEE_v4.0

Genomic

  1. NW_024881278.1 Reference T.alba_DEE_v4.0

    Range
    8222111..8251436
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_032989267.2 → XP_032845158.1  zinc finger CCCH domain-containing protein 6

    Conserved Domains (4) summary
    PHA03247
    Location:758 → 1051
    PHA03247; large tegument protein UL36; Provisional
    pfam09606
    Location:495 → 598
    Med15; ARC105 or Med15 subunit of Mediator complex non-fungal
    pfam15663
    Location:310 → 370
    zf-CCCH_3; Zinc-finger containing family
    pfam18345
    Location:317 → 335
    zf_CCCH_4; Zinc finger domain
Nucleotide Protein
Heading Accession and Version

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