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STX16 syntaxin 16 [ Opisthocomus hoazin ]

Gene ID: 104328795, updated on 12-Mar-2024

Summary

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Gene symbol
STX16
Gene description
syntaxin 16
Locus tag
N306_01708
Gene type
protein coding
RefSeq status
MODEL
Organism
Opisthocomus hoazin
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Opisthocomiformes; Opisthocomidae; Opisthocomus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
10
Annotation release Status Assembly Chr Location
100 current ASM69207v1 (GCF_000692075.1) Unplaced Scaffold NW_009901057.1 (5722367..5735323)

NW_009901057.1Genomic Context describing neighboring genes Neighboring gene VAMP associated protein B and C Neighboring gene APC down-regulated 1 like Neighboring gene aminopeptidase like 1 Neighboring gene GNAS complex locus

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_009901057.1 Unplaced Scaffold Reference ASM69207v1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables SNAP receptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables SNARE binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in intracellular protein transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in vesicle docking IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in vesicle fusion IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in vesicle-mediated transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of SNARE complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in endomembrane system IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
syntaxin-16
Names
Syntaxin-16

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Opisthocomus hoazin Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM69207v1

Genomic

  1. NW_009901057.1 Reference ASM69207v1

    Range
    5722367..5735323
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_009933846.1 → XP_009932148.1  syntaxin-16 isoform X1

    UniProtKB/TrEMBL
    A0A091W3B1
    Conserved Domains (2) summary
    cd15845
    Location:208 → 247
    SNARE_syntaxin16; SNARE motif of syntaxin 16
    cl00143
    Location:42 → 148
    SynN; Syntaxin N-terminus domain; syntaxins are nervous system-specific proteins implicated in the docking of synaptic vesicles with the presynaptic plasma membrane; they are a family of receptors for intracellular transport vesicles; each target membrane may ...

  2. XM_009933847.1 → XP_009932149.1  syntaxin-16 isoform X2

    UniProtKB/TrEMBL
    A0A091W3B1
    Conserved Domains (2) summary
    cd15845
    Location:207 → 246
    SNARE_syntaxin16; SNARE motif of syntaxin 16
    cl00143
    Location:41 → 147
    SynN; Syntaxin N-terminus domain; syntaxins are nervous system-specific proteins implicated in the docking of synaptic vesicles with the presynaptic plasma membrane; they are a family of receptors for intracellular transport vesicles; each target membrane may ...

  3. XM_009933848.1 → XP_009932150.1  syntaxin-16 isoform X3

    UniProtKB/TrEMBL
    A0A091W3B1
    Conserved Domains (2) summary
    cd15845
    Location:203 → 242
    SNARE_syntaxin16; SNARE motif of syntaxin 16
    cl00143
    Location:37 → 143
    SynN; Syntaxin N-terminus domain; syntaxins are nervous system-specific proteins implicated in the docking of synaptic vesicles with the presynaptic plasma membrane; they are a family of receptors for intracellular transport vesicles; each target membrane may ...

  4. XM_009933849.1 → XP_009932151.1  syntaxin-16 isoform X4

    See identical proteins and their annotated locations for XP_009932151.1

    UniProtKB/TrEMBL
    A0A091W3B1
    Conserved Domains (2) summary
    cd15845
    Location:195 → 234
    SNARE_syntaxin16; SNARE motif of syntaxin 16
    cl00143
    Location:29 → 135
    SynN; Syntaxin N-terminus domain; syntaxins are nervous system-specific proteins implicated in the docking of synaptic vesicles with the presynaptic plasma membrane; they are a family of receptors for intracellular transport vesicles; each target membrane may ...

  5. XM_009933850.1 → XP_009932152.1  syntaxin-16 isoform X4

    See identical proteins and their annotated locations for XP_009932152.1

    UniProtKB/TrEMBL
    A0A091W3B1
    Conserved Domains (2) summary
    cd15845
    Location:195 → 234
    SNARE_syntaxin16; SNARE motif of syntaxin 16
    cl00143
    Location:29 → 135
    SynN; Syntaxin N-terminus domain; syntaxins are nervous system-specific proteins implicated in the docking of synaptic vesicles with the presynaptic plasma membrane; they are a family of receptors for intracellular transport vesicles; each target membrane may ...
Nucleotide Protein
Heading Accession and Version

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