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PAXBP1 PAX3 and PAX7 binding protein 1 [ Opisthocomus hoazin ]

Gene ID: 104328364, updated on 3-Aug-2024

Summary

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Gene symbol
PAXBP1
Gene description
PAX3 and PAX7 binding protein 1
Locus tag
N306_05437
Gene type
protein coding
RefSeq status
MODEL
Organism
Opisthocomus hoazin
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Opisthocomiformes; Opisthocomidae; Opisthocomus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
18
Annotation release Status Assembly Chr Location
100 current ASM69207v1 (GCF_000692075.1) Unplaced Scaffold NW_009900919.1 (3105265..3140793, complement)

NW_009900919.1Genomic Context describing neighboring genes Neighboring gene cilia and flagella associated protein 298 Neighboring gene synaptojanin 1 Neighboring gene exosomal polycystin 1 interacting protein Neighboring gene interferon alpha and beta receptor subunit 2

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_009900919.1 Unplaced Scaffold Reference ASM69207v1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in mRNA splicing, via spliceosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
PAX3- and PAX7-binding protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Opisthocomus hoazin Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM69207v1

Genomic

  1. NW_009900919.1 Reference ASM69207v1

    Range
    3105265..3140793 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_009933379.1 → XP_009931681.1  PAX3- and PAX7-binding protein 1

    UniProtKB/TrEMBL
    A0A091W3R0
    Conserved Domains (2) summary
    pfam07842
    Location:496 → 707
    GCFC; GC-rich sequence DNA-binding factor-like protein
    pfam15458
    Location:178 → 331
    NTR2; Nineteen complex-related protein 2
Nucleotide Protein
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