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ASXL1 ASXL transcriptional regulator 1 [ Haliaeetus albicilla (white-tailed eagle) ]

Gene ID: 104315158, updated on 3-Aug-2024

Summary

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Gene symbol
ASXL1
Gene description
ASXL transcriptional regulator 1
Locus tag
N329_12578
Gene type
protein coding
RefSeq status
MODEL
Organism
Haliaeetus albicilla
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Accipitrimorphae; Accipitriformes; Accipitridae; Accipitrinae; Haliaeetus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
12
Annotation release Status Assembly Chr Location
100 current ASM69140v1 (GCF_000691405.1) Unplaced Scaffold NW_009762631.1 (52..17364)

NW_009762631.1Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_009762631.1 Unplaced Scaffold Reference ASM69140v1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables chromatin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables peroxisome proliferator activated receptor binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in animal organ morphogenesis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of PR-DUB complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
putative Polycomb group protein ASXL1
Names
Putative Polycomb group protein ASXL1
additional sex combs like 1, transcriptional regulator

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Haliaeetus albicilla Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM69140v1

Genomic

  1. NW_009762631.1 Reference ASM69140v1

    Range
    52..17364
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_009914948.1 → XP_009913250.1  putative Polycomb group protein ASXL1

    See identical proteins and their annotated locations for XP_009913250.1

    Conserved Domains (3) summary
    pfam05066
    Location:1 → 54
    HARE-HTH; HB1, ASXL, restriction endonuclease HTH domain
    pfam13919
    Location:207 → 330
    ASXH; Asx homology domain
    pfam13922
    Location:1478 → 1512
    PHD_3; PHD domain of transcriptional enhancer, Asx

  2. XM_009914949.1 → XP_009913251.1  putative Polycomb group protein ASXL1

    See identical proteins and their annotated locations for XP_009913251.1

    Conserved Domains (3) summary
    pfam05066
    Location:1 → 54
    HARE-HTH; HB1, ASXL, restriction endonuclease HTH domain
    pfam13919
    Location:207 → 330
    ASXH; Asx homology domain
    pfam13922
    Location:1478 → 1512
    PHD_3; PHD domain of transcriptional enhancer, Asx

  3. XM_009914951.1 → XP_009913253.1  putative Polycomb group protein ASXL1

    See identical proteins and their annotated locations for XP_009913253.1

    Conserved Domains (3) summary
    pfam05066
    Location:1 → 54
    HARE-HTH; HB1, ASXL, restriction endonuclease HTH domain
    pfam13919
    Location:207 → 330
    ASXH; Asx homology domain
    pfam13922
    Location:1478 → 1512
    PHD_3; PHD domain of transcriptional enhancer, Asx

  4. XM_009914952.1 → XP_009913254.1  putative Polycomb group protein ASXL1

    See identical proteins and their annotated locations for XP_009913254.1

    Conserved Domains (3) summary
    pfam05066
    Location:1 → 54
    HARE-HTH; HB1, ASXL, restriction endonuclease HTH domain
    pfam13919
    Location:207 → 330
    ASXH; Asx homology domain
    pfam13922
    Location:1478 → 1512
    PHD_3; PHD domain of transcriptional enhancer, Asx

  5. XM_009914950.1 → XP_009913252.1  putative Polycomb group protein ASXL1

    See identical proteins and their annotated locations for XP_009913252.1

    Conserved Domains (3) summary
    pfam05066
    Location:1 → 54
    HARE-HTH; HB1, ASXL, restriction endonuclease HTH domain
    pfam13919
    Location:207 → 330
    ASXH; Asx homology domain
    pfam13922
    Location:1478 → 1512
    PHD_3; PHD domain of transcriptional enhancer, Asx

  6. XM_009914953.1 → XP_009913255.1  putative Polycomb group protein ASXL1

    See identical proteins and their annotated locations for XP_009913255.1

    Conserved Domains (3) summary
    pfam05066
    Location:1 → 54
    HARE-HTH; HB1, ASXL, restriction endonuclease HTH domain
    pfam13919
    Location:207 → 330
    ASXH; Asx homology domain
    pfam13922
    Location:1478 → 1512
    PHD_3; PHD domain of transcriptional enhancer, Asx
Nucleotide Protein
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