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HPCA hippocalcin [ Dryobates pubescens (Downy woodpecker) ]

Gene ID: 104307374, updated on 3-Aug-2024

Summary

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Gene symbol
HPCA
Gene description
hippocalcin
Locus tag
N307_14670
See related
EnsemblRapid:ENSPPUG00010006592
Gene type
protein coding
RefSeq status
MODEL
Organism
Dryobates pubescens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Coraciimorphae; Piciformes; Picidae; Dryobates
Orthologs
human mouse all
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Genomic context

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See HPCA in Genome Data Viewer
Location:
chromosome: 20
Exon count:
4
Annotation release Status Assembly Chr Location
RS_2023_03 current bDryPub1.pri (GCF_014839835.1) 20 NC_071631.1 (2089247..2093611, complement)
100 previous assembly ASM69900v1 (GCF_000699005.1) Unplaced Scaffold NW_009666203.1 (2937463..2939668)

Chromosome 20 - NC_071631.1Genomic Context describing neighboring genes Neighboring gene ring finger protein 19B Neighboring gene transmembrane protein 54 Neighboring gene fibronectin type III domain containing 5 Neighboring gene tyrosyl-tRNA synthetase 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables calcium ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
neuron-specific calcium-binding protein hippocalcin
Names
Neuron-specific calcium-binding protein hippocalcin

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_014839835.1-RS_2023_03

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bDryPub1.pri

Genomic

  1. NC_071631.1 Reference bDryPub1.pri

    Range
    2089247..2093611 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_054170993.1 → XP_054026968.1  neuron-specific calcium-binding protein hippocalcin

    UniProtKB/TrEMBL
    A0A093H6N3
    Related
    ENSPPUP00010006226.1, ENSPPUT00010010226.1

  2. XM_054170992.1 → XP_054026967.1  neuron-specific calcium-binding protein hippocalcin

    UniProtKB/TrEMBL
    A0A093H6N3
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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