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PBX3 PBX homeobox 3 [ Dryobates pubescens (Downy woodpecker) ]

Gene ID: 104306513, updated on 3-Aug-2024

Summary

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Gene symbol
PBX3
Gene description
PBX homeobox 3
See related
EnsemblRapid:ENSPPUG00010010689
Gene type
protein coding
RefSeq status
MODEL
Organism
Dryobates pubescens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Coraciimorphae; Piciformes; Picidae; Dryobates
Orthologs
human mouse all
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Genomic context

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See PBX3 in Genome Data Viewer
Location:
chromosome: 29
Exon count:
10
Annotation release Status Assembly Chr Location
RS_2023_03 current bDryPub1.pri (GCF_014839835.1) 29 NC_071640.1 (6197827..6314820)
100 previous assembly ASM69900v1 (GCF_000699005.1) Unplaced Scaffold NW_009665896.1 (3715867..3828723)

Chromosome 29 - NC_071640.1Genomic Context describing neighboring genes Neighboring gene GTPase activating protein and VPS9 domains 1 Neighboring gene MAPK associated protein 1 Neighboring gene multivesicular body subunit 12B Neighboring gene LIM homeobox transcription factor 1 beta

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in animal organ morphogenesis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in brain development IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in embryonic organ development IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in eye development IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in neuron development IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
pre-B-cell leukemia transcription factor 3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_014839835.1-RS_2023_03

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bDryPub1.pri

Genomic

  1. NC_071640.1 Reference bDryPub1.pri

    Range
    6197827..6314820
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_054174221.1 → XP_054030196.1  pre-B-cell leukemia transcription factor 3 isoform X2

  2. XM_054174220.1 → XP_054030195.1  pre-B-cell leukemia transcription factor 3 isoform X1

    Related
    ENSPPUP00010009701.1, ENSPPUT00010017031.1

  3. XM_054174222.1 → XP_054030197.1  pre-B-cell leukemia transcription factor 3 isoform X3

    Related
    ENSPPUP00010009679.1, ENSPPUT00010016946.1
Nucleotide Protein
Heading Accession and Version

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