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CABIN1 calcineurin binding protein 1 [ Charadrius vociferus (killdeer) ]

Gene ID: 104293708, updated on 3-Aug-2024

Summary

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Gene symbol
CABIN1
Gene description
calcineurin binding protein 1
Locus tag
N301_16791
Gene type
protein coding
RefSeq status
MODEL
Organism
Charadrius vociferus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Charadriiformes; Charadriidae; Charadrius
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
36
Annotation release Status Assembly Chr Location
100 current ASM70802v2 (GCF_000708025.1) Unplaced Scaffold NW_009658627.1 (459767..579221, complement)

NW_009658627.1Genomic Context describing neighboring genes Neighboring gene CRK like proto-oncogene, adaptor protein Neighboring gene T-box-containing protein TBX6L Neighboring gene glutathione S-transferase theta-1-like Neighboring gene glutathione S-transferase theta 2

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_009658627.1 Unplaced Scaffold Reference ASM70802v2

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables nucleosome binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in chromatin organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
calcineurin-binding protein cabin-1
Names
Calcineurin-binding protein cabin-1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Charadrius vociferus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM70802v2

Genomic

  1. NW_009658627.1 Reference ASM70802v2

    Range
    459767..579221 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_009893228.1 → XP_009891530.1  calcineurin-binding protein cabin-1

    UniProtKB/TrEMBL
    A0A0A0B0V3
    Conserved Domains (4) summary
    sd00006
    Location:91 → 119
    TPR; TPR repeat [structural motif]
    pfam09047
    Location:2117 → 2151
    MEF2_binding; MEF2 binding
    pfam13414
    Location:93 → 156
    TPR_11; TPR repeat
    pfam13424
    Location:37 → 121
    TPR_12; Tetratricopeptide repeat
Nucleotide Protein
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