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UBE2D3 ubiquitin conjugating enzyme E2 D3 [ Charadrius vociferus (killdeer) ]

Gene ID: 104286861, updated on 3-Aug-2024

Summary

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Gene symbol
UBE2D3
Gene description
ubiquitin conjugating enzyme E2 D3
Locus tag
N301_12587
Gene type
protein coding
RefSeq status
MODEL
Organism
Charadrius vociferus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Charadriiformes; Charadriidae; Charadrius
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
6
Annotation release Status Assembly Chr Location
100 current ASM70802v2 (GCF_000708025.1) Unplaced Scaffold NW_009648444.1 (3363144..3372187)

NW_009648444.1Genomic Context describing neighboring genes Neighboring gene solute carrier family 9 member B2 Neighboring gene CDGSH iron sulfur domain 2 Neighboring gene mannosidase beta Neighboring gene nuclear factor kappa B subunit 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_009648444.1 Unplaced Scaffold Reference ASM70802v2

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ubiquitin conjugating enzyme activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein K11-linked ubiquitination IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in ubiquitin-dependent protein catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ubiquitin-conjugating enzyme E2 D3
Names
Ubiquitin-conjugating enzyme E2 D3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Charadrius vociferus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM70802v2

Genomic

  1. NW_009648444.1 Reference ASM70802v2

    Range
    3363144..3372187
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_009885506.1 → XP_009883808.1  ubiquitin-conjugating enzyme E2 D3 isoform X1

    See identical proteins and their annotated locations for XP_009883808.1

    UniProtKB/TrEMBL
    A0A0A0AGT5
    Conserved Domains (2) summary
    COG5078
    Location:9 → 125
    COG5078; Ubiquitin-protein ligase [Posttranslational modification, protein turnover, chaperones]
    cl00154
    Location:8 → 124
    UBCc; Ubiquitin-conjugating enzyme E2, catalytic (UBCc) domain. This is part of the ubiquitin-mediated protein degradation pathway in which a thiol-ester linkage forms between a conserved cysteine and the C-terminus of ubiquitin and complexes with ubiquitin ...

  2. XM_009885507.1 → XP_009883809.1  ubiquitin-conjugating enzyme E2 D3 isoform X2

    See identical proteins and their annotated locations for XP_009883809.1

    UniProtKB/TrEMBL
    A0A0A0AGT5
    Conserved Domains (1) summary
    cl00154
    Location:8 → 124
    UBCc; Ubiquitin-conjugating enzyme E2, catalytic (UBCc) domain. This is part of the ubiquitin-mediated protein degradation pathway in which a thiol-ester linkage forms between a conserved cysteine and the C-terminus of ubiquitin and complexes with ubiquitin ...
Nucleotide Protein
Heading Accession and Version

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