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SPATA6 spermatogenesis associated 6 [ Charadrius vociferus (killdeer) ]

Gene ID: 104286087, updated on 3-Aug-2024

Summary

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Gene symbol
SPATA6
Gene description
spermatogenesis associated 6
Locus tag
N301_03306
Gene type
protein coding
RefSeq status
MODEL
Organism
Charadrius vociferus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Charadriiformes; Charadriidae; Charadrius
Orthologs
human mouse all
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Genomic context

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See SPATA6 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
12
Annotation release Status Assembly Chr Location
100 current ASM70802v2 (GCF_000708025.1) Unplaced Scaffold NW_009648332.1 (4931899..4966630)

NW_009648332.1Genomic Context describing neighboring genes Neighboring gene ELAV like RNA binding protein 4 Neighboring gene AGBL carboxypeptidase 4 Neighboring gene BEN domain containing 5 Neighboring gene solute carrier family 5 member 9 Neighboring gene TraB domain containing 2B

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_009648332.1 Unplaced Scaffold Reference ASM70802v2

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables myosin light chain binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in motile cilium assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in spermatogenesis IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
spermatogenesis-associated protein 6
Names
Spermatogenesis-associated protein 6

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Charadrius vociferus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM70802v2

Genomic

  1. NW_009648332.1 Reference ASM70802v2

    Range
    4931899..4966630
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_009884637.1 → XP_009882939.1  spermatogenesis-associated protein 6

    UniProtKB/TrEMBL
    A0A0A0AFS0
    Conserved Domains (1) summary
    pfam14909
    Location:8 → 139
    SPATA6; Spermatogenesis-assoc protein 6
Nucleotide Protein
Heading Accession and Version

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