U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

SEC61A2 SEC61 translocon subunit alpha 2 [ Charadrius vociferus (killdeer) ]

Gene ID: 104284651, updated on 3-Aug-2024

Summary

Go to the top of the page Help
Gene symbol
SEC61A2
Gene description
SEC61 translocon subunit alpha 2
Gene type
protein coding
RefSeq status
MODEL
Organism
Charadrius vociferus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Charadriiformes; Charadriidae; Charadrius
Annotation information
Annotation category: partial on reference assembly
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
Location:
chromosome: Un
Exon count:
11
Annotation release Status Assembly Chr Location
100 current ASM70802v2 (GCF_000708025.1) Unplaced Scaffold NW_009647856.1 (6975733..6991714, complement)

NW_009647856.1Genomic Context describing neighboring genes Neighboring gene cell division cycle 123 Neighboring gene nudix hydrolase 5 Neighboring gene dehydrogenase E1 and transketolase domain containing 1 Neighboring gene UPF2 regulator of nonsense mediated mRNA decay

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NW_009647856.1 Unplaced Scaffold Reference ASM70802v2

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ribosome binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables signal sequence binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in SRP-dependent cotranslational protein targeting to membrane, translocation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in post-translational protein targeting to membrane, translocation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of Sec61 translocon complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
LOW QUALITY PROTEIN: protein transport protein Sec61 subunit alpha isoform 2
Names
SEC61 translocon alpha 2 subunit

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Charadrius vociferus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM70802v2

Genomic

  1. NW_009647856.1 Reference ASM70802v2

    Range
    6975733..6991714 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_009883011.1 → XP_009881313.1  LOW QUALITY PROTEIN: protein transport protein Sec61 subunit alpha isoform 2

    UniProtKB/TrEMBL
    A0A0A0AT45
    Conserved Domains (3) summary
    PTZ00219
    Location:5 → 464
    PTZ00219; Sec61 alpha subunit; Provisional
    pfam00344
    Location:76 → 451
    SecY; SecY translocase
    pfam10559
    Location:41 → 74
    Plug_translocon; Plug domain of Sec61p
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.