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TRIM71 tripartite motif containing 71 [ Gavia stellata (red-throated loon) ]

Gene ID: 104258826, updated on 3-Aug-2024

Summary

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Gene symbol
TRIM71
Gene description
tripartite motif containing 71
Locus tag
N328_05885
See related
EnsemblRapid:ENSGSTG00005001534
Gene type
protein coding
RefSeq status
MODEL
Organism
Gavia stellata
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Aequornithes; Gaviiformes; Gaviidae; Gavia
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 6
Exon count:
4
Annotation release Status Assembly Chr Location
RS_2023_09 current bGavSte3.hap2 (GCF_030936135.1) 6 NC_082599.1 (46105135..46162186, complement)
100 previous assembly ASM69087v1 (GCF_000690875.1) Unplaced Scaffold NW_009309951.1 (46158..61843, complement)

Chromosome 6 - NC_082599.1Genomic Context describing neighboring genes Neighboring gene dynein cytoplasmic 1 light intermediate chain 1 Neighboring gene CCR4-NOT transcription complex subunit 10 Neighboring gene T cell activation inhibitor, mitochondrial Neighboring gene testis and ovary specific TOPAZ 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ubiquitin protein ligase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in proteasome-mediated ubiquitin-dependent protein catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein polyubiquitination IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
E3 ubiquitin-protein ligase TRIM71

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_030936135.1-RS_2023_09

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bGavSte3.hap2

Genomic

  1. NC_082599.1 Reference bGavSte3.hap2

    Range
    46105135..46162186 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_059819052.1 → XP_059675035.1  E3 ubiquitin-protein ligase TRIM71

    Related
    ENSGSTP00005002354.1, ENSGSTT00005002407.1
Nucleotide Protein
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