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SNX25 sorting nexin 25 [ Egretta garzetta (little egret) ]

Gene ID: 104129433, updated on 3-Aug-2024

Summary

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Gene symbol
SNX25
Gene description
sorting nexin 25
Locus tag
Z169_11205
Gene type
protein coding
RefSeq status
MODEL
Organism
Egretta garzetta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Aequornithes; Pelecaniformes; Ardeidae; Egretta
Orthologs
human mouse all
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Genomic context

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See SNX25 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
19
Annotation release Status Assembly Chr Location
101 current ASM68718v1 (GCF_000687185.1) Unplaced Scaffold NW_009260268.1 (4415169..4490964)

NW_009260268.1Genomic Context describing neighboring genes Neighboring gene solute carrier family 25 member 4 Neighboring gene cilia and flagella associated protein 97 Neighboring gene LRP2 binding protein Neighboring gene ankyrin repeat domain 37 Neighboring gene UFM1 specific peptidase 2

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_009260268 Unplaced Scaffold Reference ASM68718v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables phosphatidylinositol binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in early endosome membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in intracellular membrane-bounded organelle IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
sorting nexin-25
Names
Sorting nexin-25

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Egretta garzetta Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM68718v1 Primary Assembly

Genomic

  1. NW_009260268.1 Reference ASM68718v1 Primary Assembly

    Range
    4415169..4490964
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_009642362.2 → XP_009640657.2  sorting nexin-25

    UniProtKB/TrEMBL
    A0A091JGF2
    Conserved Domains (4) summary
    cd06878
    Location:532 → 654
    PX_SNX25; The phosphoinositide binding Phox Homology domain of Sorting Nexin 25
    pfam08628
    Location:731 → 836
    Nexin_C; Sorting nexin C terminal
    cl02564
    Location:30 → 187
    PXA; PXA domain
    cl02565
    Location:323 → 431
    RGS; Regulator of G protein signaling (RGS) domain superfamily
Nucleotide Protein
Heading Accession and Version

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