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DYNC2LI1 dynein cytoplasmic 2 light intermediate chain 1 [ Egretta garzetta (little egret) ]

Gene ID: 104128750, updated on 3-Aug-2024

Summary

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Gene symbol
DYNC2LI1
Gene description
dynein cytoplasmic 2 light intermediate chain 1
Locus tag
Z169_03120
Gene type
protein coding
RefSeq status
MODEL
Organism
Egretta garzetta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Aequornithes; Pelecaniformes; Ardeidae; Egretta
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
13
Annotation release Status Assembly Chr Location
101 current ASM68718v1 (GCF_000687185.1) Unplaced Scaffold NW_009260133.1 (3453822..3478582)

NW_009260133.1Genomic Context describing neighboring genes Neighboring gene THADA armadillo repeat containing Neighboring gene pleckstrin homology, MyTH4 and FERM domain containing H2 Neighboring gene ATP binding cassette subfamily G member 5 Neighboring gene ATP binding cassette subfamily G member 8

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_009260133 Unplaced Scaffold Reference ASM68718v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables dynein heavy chain binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in intraciliary retrograde transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in intraciliary transport involved in cilium assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in axoneme IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in ciliary basal body IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of cytoplasmic dynein complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
cytoplasmic dynein 2 light intermediate chain 1
Names
Cytoplasmic dynein 2 light intermediate chain 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Egretta garzetta Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM68718v1 Primary Assembly

Genomic

  1. NW_009260133.1 Reference ASM68718v1 Primary Assembly

    Range
    3453822..3478582
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_035897018.1 → XP_035752911.1  cytoplasmic dynein 2 light intermediate chain 1 isoform X1

    UniProtKB/TrEMBL
    A0A091JB99
    Conserved Domains (1) summary
    pfam05783
    Location:34 → 267
    DLIC; Dynein light intermediate chain (DLIC)

  2. XM_035897019.1 → XP_035752912.1  cytoplasmic dynein 2 light intermediate chain 1 isoform X3

    UniProtKB/TrEMBL
    A0A091JB99
    Conserved Domains (1) summary
    pfam05783
    Location:34 → 267
    DLIC; Dynein light intermediate chain (DLIC)

  3. XM_009641596.2 → XP_009639891.1  cytoplasmic dynein 2 light intermediate chain 1 isoform X2

    UniProtKB/TrEMBL
    A0A091JB99
    Conserved Domains (1) summary
    cl21455
    Location:35 → 133
    P-loop_NTPase; P-loop containing Nucleoside Triphosphate Hydrolases
Nucleotide Protein
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