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SYN2 synapsin II [ Egretta garzetta (little egret) ]

Gene ID: 104124335, updated on 3-Aug-2024

Summary

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Gene symbol
SYN2
Gene description
synapsin II
Locus tag
Z169_12610
Gene type
protein coding
RefSeq status
MODEL
Organism
Egretta garzetta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Aequornithes; Pelecaniformes; Ardeidae; Egretta
Also known as
Synapsin-2
Orthologs
human mouse all
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Genomic context

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See SYN2 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
13
Annotation release Status Assembly Chr Location
101 current ASM68718v1 (GCF_000687185.1) Unplaced Scaffold NW_009259328.1 (1545921..1733280, complement)

NW_009259328.1Genomic Context describing neighboring genes Neighboring gene MKRN2 opposite strand Neighboring gene tRNA splicing endonuclease subunit 2 Neighboring gene peroxisome proliferator activated receptor gamma Neighboring gene TIMP metallopeptidase inhibitor 4 Neighboring gene TAM41 mitochondrial translocator assembly and maintenance homolog Neighboring gene vestigial like family member 4 Neighboring gene autophagy related 7

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_009259328 Unplaced Scaffold Reference ASM68718v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in neurotransmitter secretion IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in synaptic vesicle IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in synaptic vesicle membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
synapsin-2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Egretta garzetta Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM68718v1 Primary Assembly

Genomic

  1. NW_009259328.1 Reference ASM68718v1 Primary Assembly

    Range
    1545921..1733280 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_009636662.1 → XP_009634957.1  synapsin-2

    Conserved Domains (2) summary
    pfam02078
    Location:191 → 276
    Synapsin; Synapsin, N-terminal domain
    cl17255
    Location:278 → 480
    ATP-grasp_4; ATP-grasp domain
Nucleotide Protein
Heading Accession and Version

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