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BRIP1 BRCA1 interacting DNA helicase 1 [ Egretta garzetta (little egret) ]

Gene ID: 104121836, updated on 20-Sep-2024

Summary

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Gene symbol
BRIP1
Gene description
BRCA1 interacting DNA helicase 1
Locus tag
Z169_00825
Gene type
protein coding
RefSeq status
MODEL
Organism
Egretta garzetta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Aequornithes; Pelecaniformes; Ardeidae; Egretta
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
21
Annotation release Status Assembly Chr Location
101 current ASM68718v1 (GCF_000687185.1) Unplaced Scaffold NW_009258884.1 (1205416..1268459, complement)

NW_009258884.1Genomic Context describing neighboring genes Neighboring gene T-box transcription factor 2 Neighboring gene T-box transcription factor 4 Neighboring gene integrator complex subunit 2 Neighboring gene mediator complex subunit 13

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_009258884 Unplaced Scaffold Reference ASM68718v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables DNA helicase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in double-strand break repair involved in meiotic recombination IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in nucleotide-excision repair IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
Fanconi anemia group J protein
Names
BRCA1 interacting helicase 1
BRCA1 interacting protein C-terminal helicase 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Egretta garzetta Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM68718v1 Primary Assembly

Genomic

  1. NW_009258884.1 Reference ASM68718v1 Primary Assembly

    Range
    1205416..1268459 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_035889533.1 → XP_035745426.1  Fanconi anemia group J protein isoform X1

    UniProtKB/TrEMBL
    A0A091IUC2
    Conserved Domains (2) summary
    TIGR00604
    Location:258 → 895
    rad3; DNA repair helicase (rad3)
    cl28899
    Location:40 → 66
    DEAD-like_helicase_N; N-terminal helicase domain of the DEAD-box helicase superfamily

  2. XM_035889534.1 → XP_035745427.1  Fanconi anemia group J protein isoform X2

    UniProtKB/TrEMBL
    A0A091IUC2
    Conserved Domains (3) summary
    PRK08074
    Location:23 → 61
    PRK08074; bifunctional ATP-dependent DNA helicase/DNA polymerase III subunit epsilon; Validated
    TIGR00604
    Location:257 → 894
    rad3; DNA repair helicase (rad3)
    cl28899
    Location:43 → 68
    DEAD-like_helicase_N; N-terminal helicase domain of the DEAD-box helicase superfamily

  3. XM_035889532.1 → XP_035745425.1  Fanconi anemia group J protein isoform X1

    UniProtKB/TrEMBL
    A0A091IUC2
    Conserved Domains (2) summary
    TIGR00604
    Location:258 → 895
    rad3; DNA repair helicase (rad3)
    cl28899
    Location:40 → 66
    DEAD-like_helicase_N; N-terminal helicase domain of the DEAD-box helicase superfamily
Nucleotide Protein
Heading Accession and Version

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