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TOM1 target of myb1 membrane trafficking protein [ Fulmarus glacialis (Northern fulmar) ]

Gene ID: 104082833, updated on 3-Aug-2024

Summary

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Gene symbol
TOM1
Gene description
target of myb1 membrane trafficking protein
Locus tag
N327_06099
Gene type
protein coding
RefSeq status
MODEL
Organism
Fulmarus glacialis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Aequornithes; Procellariiformes; Procellariidae; Fulmarus
Orthologs
human mouse all
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Genomic context

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See TOM1 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
14
Annotation release Status Assembly Chr Location
100 current ASM69083v1 (GCF_000690835.1) Unplaced Scaffold NW_009235600.1 (6990..19995)

NW_009235600.1Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_009235600.1 Unplaced Scaffold Reference ASM69083v1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables clathrin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables phosphatidylinositol binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ubiquitin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in signal transduction IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
target of Myb protein 1
Names
Target of Myb protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Fulmarus glacialis Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM69083v1

Genomic

  1. NW_009235600.1 Reference ASM69083v1

    Range
    6990..19995
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_009586089.1 → XP_009584384.1  target of Myb protein 1 isoform X1

    UniProtKB/TrEMBL
    A0A093JNL2
    Conserved Domains (2) summary
    cd14236
    Location:181 → 275
    GAT_TOM1; GAT domain found in target of Myb protein 1 (Tom1)
    cl02544
    Location:1 → 119
    VHS_ENTH_ANTH; VHS, ENTH and ANTH domain superfamily; composed of proteins containing a VHS, ENTH or ANTH domain. The VHS domain is present in Vps27 (Vacuolar Protein Sorting), Hrs (Hepatocyte growth factor-regulated tyrosine kinase substrate) and STAM (Signal ...

  2. XM_009586090.1 → XP_009584385.1  target of Myb protein 1 isoform X2

    UniProtKB/TrEMBL
    A0A093JNL2
    Conserved Domains (2) summary
    cl02544
    Location:1 → 90
    VHS_ENTH_ANTH; VHS, ENTH and ANTH domain superfamily; composed of proteins containing a VHS, ENTH or ANTH domain. The VHS domain is present in Vps27 (Vacuolar Protein Sorting), Hrs (Hepatocyte growth factor-regulated tyrosine kinase substrate) and STAM (Signal ...
    cl03906
    Location:136 → 230
    GAT_SF; GAT domain found in eukaryotic ADP-ribosylation factor (Arf)-binding proteins (GGAs), metazoan myb protein 1 (Tom1)-like proteins, and similar proteins

  3. XM_009586091.1 → XP_009584386.1  target of Myb protein 1 isoform X3

    Conserved Domains (2) summary
    cl02544
    Location:1 → 90
    VHS_ENTH_ANTH; VHS, ENTH and ANTH domain superfamily; composed of proteins containing a VHS, ENTH or ANTH domain. The VHS domain is present in Vps27 (Vacuolar Protein Sorting), Hrs (Hepatocyte growth factor-regulated tyrosine kinase substrate) and STAM (Signal ...
    cl03906
    Location:89 → 181
    GAT_SF; GAT domain found in eukaryotic ADP-ribosylation factor (Arf)-binding proteins (GGAs), metazoan myb protein 1 (Tom1)-like proteins, and similar proteins
Nucleotide Protein
Heading Accession and Version

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