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GRIA3 glutamate ionotropic receptor AMPA type subunit 3 [ Cuculus canorus (common cuckoo) ]

Gene ID: 104068496, updated on 3-Apr-2024

Summary

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Gene symbol
GRIA3
Gene description
glutamate ionotropic receptor AMPA type subunit 3
Locus tag
N303_14054
See related
EnsemblRapid:ENSCCOG00010014507
Gene type
protein coding
RefSeq status
MODEL
Organism
Cuculus canorus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Cuculiformes; Cuculidae; Cuculus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 10
Exon count:
17
Annotation release Status Assembly Chr Location
RS_2023_02 current bCucCan1.pri (GCF_017976375.1) 10 NC_071410.1 (15629899..15785144)
100 previous assembly ASM70932v1 (GCF_000709325.1) Unplaced Scaffold NW_009243873.1 (448237..605723)

Chromosome 10 - NC_071410.1Genomic Context describing neighboring genes Neighboring gene C1GALT1 specific chaperone 1 Neighboring gene uncharacterized LOC128853121 Neighboring gene uncharacterized LOC128853219 Neighboring gene THO complex subunit 2 Neighboring gene X-linked inhibitor of apoptosis

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables AMPA glutamate receptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables transmitter-gated monoatomic ion channel activity involved in regulation of postsynaptic membrane potential IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in modulation of chemical synaptic transmission IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in monoatomic ion transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in synaptic transmission, glutamatergic IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of AMPA glutamate receptor complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in dendritic spine IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in postsynaptic membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
glutamate receptor 3
Names
Glutamate receptor 3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_017976375.1-RS_2023_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bCucCan1.pri

Genomic

  1. NC_071410.1 Reference bCucCan1.pri

    Range
    15629899..15785144
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_009571388.2 → XP_009569683.1  glutamate receptor 3 isoform X4

    UniProtKB/TrEMBL
    A0A091FM03
    Conserved Domains (4) summary
    cd06387
    Location:29 → 400
    PBP1_iGluR_AMPA_GluR3; N-terminal leucine/isoleucine/valine-binding protein (LIVBP)-like domain of the GluR3 subunit of the AMPA receptor
    cd13715
    Location:416 → 799
    PBP2_iGluR_AMPA; The ligand-binding domain of the AMPA (alpha-amino-3-hydroxyl-5-methyl-4-isoxazolepropionic acid) subtypes of ionotropic glutamate receptors, a member of the type 2 periplasmic binding fold protein superfamily
    pfam00060
    Location:548 → 829
    Lig_chan; Ligand-gated ion channel
    pfam01094
    Location:40 → 383
    ANF_receptor; Receptor family ligand binding region

  2. XM_009571389.2 → XP_009569684.1  glutamate receptor 3 isoform X5

    UniProtKB/TrEMBL
    A0A091FM03
    Related
    ENSCCOP00010020946.1, ENSCCOT00010025701.1
    Conserved Domains (4) summary
    cd06387
    Location:29 → 400
    PBP1_iGluR_AMPA_GluR3; N-terminal leucine/isoleucine/valine-binding protein (LIVBP)-like domain of the GluR3 subunit of the AMPA receptor
    cd13715
    Location:416 → 799
    PBP2_iGluR_AMPA; The ligand-binding domain of the AMPA (alpha-amino-3-hydroxyl-5-methyl-4-isoxazolepropionic acid) subtypes of ionotropic glutamate receptors, a member of the type 2 periplasmic binding fold protein superfamily
    pfam00060
    Location:548 → 829
    Lig_chan; Ligand-gated ion channel
    pfam01094
    Location:40 → 383
    ANF_receptor; Receptor family ligand binding region

  3. XM_054075376.1 → XP_053931351.1  glutamate receptor 3 isoform X1

    Related
    ENSCCOP00010020934.1, ENSCCOT00010025682.1

  4. XM_054075377.1 → XP_053931352.1  glutamate receptor 3 isoform X2

  5. XM_054075378.1 → XP_053931353.1  glutamate receptor 3 isoform X3

    Related
    ENSCCOP00010020897.1, ENSCCOT00010025640.1

  6. XM_054075379.1 → XP_053931354.1  glutamate receptor 3 isoform X6

    Related
    ENSCCOP00010020904.1, ENSCCOT00010025651.1

RNA

  1. XR_008451393.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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