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PROX1 prospero homeobox 1 [ Cuculus canorus (common cuckoo) ]

Gene ID: 104058035, updated on 3-Aug-2024

Summary

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Gene symbol
PROX1
Gene description
prospero homeobox 1
Locus tag
N303_07618
See related
EnsemblRapid:ENSCCOG00010005028
Gene type
protein coding
RefSeq status
MODEL
Organism
Cuculus canorus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Otidimorphae; Cuculiformes; Cuculidae; Cuculus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 3
Exon count:
7
Annotation release Status Assembly Chr Location
RS_2023_02 current bCucCan1.pri (GCF_017976375.1) 3 NC_071403.1 (95042649..95092281, complement)
100 previous assembly ASM70932v1 (GCF_000709325.1) Unplaced Scaffold NW_009244848.1 (5494582..5531851)

Chromosome 3 - NC_071403.1Genomic Context describing neighboring genes Neighboring gene protein tyrosine phosphatase non-receptor type 14 Neighboring gene SET and MYND domain containing 2 Neighboring gene uncharacterized LOC128851895 Neighboring gene ribosomal protein S6 kinase C1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
prospero homeobox protein 1
Names
Prospero homeobox protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_017976375.1-RS_2023_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bCucCan1.pri

Genomic

  1. NC_071403.1 Reference bCucCan1.pri

    Range
    95042649..95092281 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_054062879.1 → XP_053918854.1  prospero homeobox protein 1 isoform X2

    UniProtKB/TrEMBL
    A0A091G1Q3
    Related
    ENSCCOP00010007602.1, ENSCCOT00010008829.1

  2. XM_054062875.1 → XP_053918850.1  prospero homeobox protein 1 isoform X1

    UniProtKB/TrEMBL
    A0A091G1Q3

  3. XM_054062877.1 → XP_053918852.1  prospero homeobox protein 1 isoform X1

    UniProtKB/TrEMBL
    A0A091G1Q3

  4. XM_054062876.1 → XP_053918851.1  prospero homeobox protein 1 isoform X1

    UniProtKB/TrEMBL
    A0A091G1Q3

  5. XM_054062878.1 → XP_053918853.1  prospero homeobox protein 1 isoform X1

    UniProtKB/TrEMBL
    A0A091G1Q3
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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