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PLAGL2 PLAG1 like zinc finger 2 [ Phalacrocorax carbo (great cormorant) ]

Gene ID: 104051506, updated on 3-Aug-2024

Summary

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Gene symbol
PLAGL2
Gene description
PLAG1 like zinc finger 2
Locus tag
N336_09335
Gene type
protein coding
RefSeq status
MODEL
Organism
Phalacrocorax carbo
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Aequornithes; Suliformes; Phalacrocoracidae; Phalacrocorax
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 14
Exon count:
6
Annotation release Status Assembly Chr Location
RS_2024_04 current bPhaCar2.1 (GCF_963921805.1) 14 NC_087526.1 (9221282..9231057, complement)
100 previous assembly ASM70892v1 (GCF_000708925.1) Unplaced Scaffold NW_009174808.1 (26432..28829, complement)

Chromosome 14 - NC_087526.1Genomic Context describing neighboring genes Neighboring gene HCK proto-oncogene, Src family tyrosine kinase Neighboring gene transmembrane 9 superfamily member 4 Neighboring gene protein O-fucosyltransferase 1 Neighboring gene kinesin family member 3B Neighboring gene ASXL transcriptional regulator 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
zinc finger protein PLAGL2
Names
Zinc finger protein PLAGL2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_963921805.1-RS_2024_04

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bPhaCar2.1

Genomic

  1. NC_087526.1 Reference bPhaCar2.1

    Range
    9221282..9231057 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_064465561.1 → XP_064321631.1  zinc finger protein PLAGL2 isoform X2

  2. XM_064465558.1 → XP_064321628.1  zinc finger protein PLAGL2 isoform X1

    UniProtKB/TrEMBL
    A0A093RGW0

  3. XM_064465559.1 → XP_064321629.1  zinc finger protein PLAGL2 isoform X1

    UniProtKB/TrEMBL
    A0A093RGW0

  4. XM_064465560.1 → XP_064321630.1  zinc finger protein PLAGL2 isoform X1

    UniProtKB/TrEMBL
    A0A093RGW0

  5. XM_009512579.2 → XP_009510874.1  zinc finger protein PLAGL2 isoform X1

    UniProtKB/TrEMBL
    A0A093RGW0
    Conserved Domains (2) summary
    sd00017
    Location:43 → 63
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam13465
    Location:86 → 110
    zf-H2C2_2; Zinc-finger double domain

  6. XM_064465564.1 → XP_064321634.1  zinc finger protein PLAGL2 isoform X2

Nucleotide Protein
Heading Accession and Version

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