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FIP1L1 factor interacting with PAPOLA and CPSF1 [ Phalacrocorax carbo (great cormorant) ]

Gene ID: 104041037, updated on 3-Aug-2024

Summary

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Gene symbol
FIP1L1
Gene description
factor interacting with PAPOLA and CPSF1
Locus tag
N336_07529
Gene type
protein coding
RefSeq status
MODEL
Organism
Phalacrocorax carbo
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Aequornithes; Suliformes; Phalacrocoracidae; Phalacrocorax
Orthologs
human mouse all
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Genomic context

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See FIP1L1 in Genome Data Viewer
Location:
chromosome: 4
Exon count:
18
Annotation release Status Assembly Chr Location
RS_2024_04 current bPhaCar2.1 (GCF_963921805.1) 4 NC_087516.1 (30434940..30478016)
100 previous assembly ASM70892v1 (GCF_000708925.1) Unplaced Scaffold NW_009133923.1 (51367..93402, complement)

Chromosome 4 - NC_087516.1Genomic Context describing neighboring genes Neighboring gene RAS like family 11 member B Neighboring gene sec1 family domain containing 2 Neighboring gene ligand of numb-protein X 1 Neighboring gene cysteine rich hydrophobic domain 2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Component Evidence Code Pubs
part_of mRNA cleavage and polyadenylation specificity factor complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
pre-mRNA 3'-end-processing factor FIP1
Names
Pre-mRNA 3'-end-processing factor FIP1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_963921805.1-RS_2024_04

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bPhaCar2.1

Genomic

  1. NC_087516.1 Reference bPhaCar2.1

    Range
    30434940..30478016
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_064449445.1 → XP_064305515.1  pre-mRNA 3'-end-processing factor FIP1 isoform X2

    UniProtKB/TrEMBL
    A0A093QG98

  2. XM_064449444.1 → XP_064305514.1  pre-mRNA 3'-end-processing factor FIP1 isoform X1

    UniProtKB/TrEMBL
    A0A093QG98

  3. XM_064449446.1 → XP_064305516.1  pre-mRNA 3'-end-processing factor FIP1 isoform X3

    UniProtKB/TrEMBL
    A0A093QG98

  4. XM_064449448.1 → XP_064305518.1  pre-mRNA 3'-end-processing factor FIP1 isoform X5

    UniProtKB/TrEMBL
    A0A093QG98

  5. XM_064449450.1 → XP_064305520.1  pre-mRNA 3'-end-processing factor FIP1 isoform X7

    UniProtKB/TrEMBL
    A0A093QG98

  6. XM_064449449.1 → XP_064305519.1  pre-mRNA 3'-end-processing factor FIP1 isoform X6

    UniProtKB/TrEMBL
    A0A093QG98

  7. XM_064449447.1 → XP_064305517.1  pre-mRNA 3'-end-processing factor FIP1 isoform X4

    UniProtKB/TrEMBL
    A0A093QG98

  8. XM_064449452.1 → XP_064305522.1  pre-mRNA 3'-end-processing factor FIP1 isoform X9

    UniProtKB/TrEMBL
    A0A093QG98

  9. XM_064449451.1 → XP_064305521.1  pre-mRNA 3'-end-processing factor FIP1 isoform X8

    UniProtKB/TrEMBL
    A0A093QG98
Nucleotide Protein
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