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RAD54L2 RAD54 like 2 [ Nipponia nippon (crested ibis) ]

Gene ID: 104022845, updated on 3-Aug-2024

Summary

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Gene symbol
RAD54L2
Gene description
RAD54 like 2
Locus tag
Y956_02523
Gene type
protein coding
RefSeq status
MODEL
Organism
Nipponia nippon
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Aequornithes; Pelecaniformes; Threskiornithidae; Nipponia
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
22
Annotation release Status Assembly Chr Location
100 current ASM70822v1 (GCF_000708225.1) Unplaced Scaffold NW_008998000.1 (228844..276391)

NW_008998000.1Genomic Context describing neighboring genes Neighboring gene RNA binding motif protein 15B Neighboring gene DDB1 and CUL4 associated factor 1 Neighboring gene semaphorin-3D-like Neighboring gene RNA binding motif protein 6

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_008998000.1 Unplaced Scaffold Reference ASM70822v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ATP hydrolysis activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ATP-dependent chromatin remodeler activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
helicase ARIP4
Names
Helicase ARIP4

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Nipponia nippon Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM70822v1 Primary Assembly

Genomic

  1. NW_008998000.1 Reference ASM70822v1 Primary Assembly

    Range
    228844..276391
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_009476609.1 → XP_009474884.1  helicase ARIP4 isoform X1

    See identical proteins and their annotated locations for XP_009474884.1

    UniProtKB/TrEMBL
    A0A091UIM7
    Conserved Domains (4) summary
    cd00046
    Location:310 → 502
    DEXDc; DEAD-like helicases superfamily. A diverse family of proteins involved in ATP-dependent RNA or DNA unwinding. This domain contains the ATP-binding region.
    pfam00176
    Location:284 → 638
    SNF2_N; SNF2 family N-terminal domain
    pfam00271
    Location:730 → 863
    Helicase_C; Helicase conserved C-terminal domain
    cl23765
    Location:89 → 149
    iSH2_PI3K_IA_R; Inter-Src homology 2 (iSH2) helical domain of Class IA Phosphoinositide 3-kinase Regulatory subunits

  2. XM_009476617.1 → XP_009474892.1  helicase ARIP4 isoform X2

    Conserved Domains (4) summary
    cd00046
    Location:308 → 500
    DEXDc; DEAD-like helicases superfamily. A diverse family of proteins involved in ATP-dependent RNA or DNA unwinding. This domain contains the ATP-binding region.
    pfam00176
    Location:282 → 636
    SNF2_N; SNF2 family N-terminal domain
    pfam00271
    Location:728 → 861
    Helicase_C; Helicase conserved C-terminal domain
    cl23765
    Location:87 → 147
    iSH2_PI3K_IA_R; Inter-Src homology 2 (iSH2) helical domain of Class IA Phosphoinositide 3-kinase Regulatory subunits
Nucleotide Protein
Heading Accession and Version

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