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CPT1A carnitine palmitoyltransferase 1A [ Nipponia nippon (crested ibis) ]

Gene ID: 104020473, updated on 3-Aug-2024

Summary

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Gene symbol
CPT1A
Gene description
carnitine palmitoyltransferase 1A
Locus tag
Y956_11079
Gene type
protein coding
RefSeq status
MODEL
Organism
Nipponia nippon
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Aequornithes; Pelecaniformes; Threskiornithidae; Nipponia
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
19
Annotation release Status Assembly Chr Location
100 current ASM70822v1 (GCF_000708225.1) Unplaced Scaffold NW_009002857.1 (116477..156103, complement)

NW_009002857.1Genomic Context describing neighboring genes Neighboring gene galanin and GMAP prepropeptide Neighboring gene testis expressed metallothionein like protein Neighboring gene trypsin I-P1-like Neighboring gene trypsin-2-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_009002857.1 Unplaced Scaffold Reference ASM70822v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables carnitine O-palmitoyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carnitine metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in fatty acid metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in mitochondrion IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
carnitine O-palmitoyltransferase 1, liver isoform

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Nipponia nippon Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM70822v1 Primary Assembly

Genomic

  1. NW_009002857.1 Reference ASM70822v1 Primary Assembly

    Range
    116477..156103 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_009473904.1 → XP_009472179.1  carnitine O-palmitoyltransferase 1, liver isoform

    See identical proteins and their annotated locations for XP_009472179.1

    UniProtKB/TrEMBL
    A0A091VY42
    Conserved Domains (2) summary
    pfam00755
    Location:171 → 759
    Carn_acyltransf; Choline/Carnitine o-acyltransferase
    pfam16484
    Location:1 → 46
    CPT_N; Carnitine O-palmitoyltransferase N-terminus
Nucleotide Protein
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