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LMO7 LIM domain 7 [ Nipponia nippon (crested ibis) ]

Gene ID: 104010860, updated on 3-Aug-2024

Summary

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Gene symbol
LMO7
Gene description
LIM domain 7
Gene type
protein coding
RefSeq status
MODEL
Organism
Nipponia nippon
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Aequornithes; Pelecaniformes; Threskiornithidae; Nipponia
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
33
Annotation release Status Assembly Chr Location
100 current ASM70822v1 (GCF_000708225.1) Unplaced Scaffold NW_008999787.1 (307248..403119, complement)

NW_008999787.1Genomic Context describing neighboring genes Neighboring gene ubiquitin C-terminal hydrolase L3 Neighboring gene COMM domain containing 6

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_008999787.1 Unplaced Scaffold Reference ASM70822v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of cell adhesion IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of signaling IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
LIM domain only protein 7

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Nipponia nippon Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM70822v1 Primary Assembly

Genomic

  1. NW_008999787.1 Reference ASM70822v1 Primary Assembly

    Range
    307248..403119 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_009463034.1 → XP_009461309.1  LIM domain only protein 7

    Conserved Domains (5) summary
    cd00136
    Location:947 → 991
    PDZ; PDZ domain, also called DHR (Dlg homologous region) or GLGF (after a conserved sequence motif). Many PDZ domains bind C-terminal polypeptides, though binding to internal (non-C-terminal) polypeptides and even to lipids has been demonstrated. ...
    cd08368
    Location:1541 → 1599
    LIM; LIM is a small protein-protein interaction domain, containing two zinc fingers
    pfam15949
    Location:524 → 670
    DUF4757; Domain of unknown function (DUF4757)
    cd16269
    Location:1171 → 1182
    GBP_C; coiled coil [structural motif]
    cl20817
    Location:1134 → 1186
    GBP_C; Guanylate-binding protein, C-terminal domain
Nucleotide Protein
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