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TTN titin [ Nipponia nippon (crested ibis) ]

Gene ID: 104010285, updated on 12-Mar-2024

Summary

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Gene symbol
TTN
Gene description
titin
Locus tag
Y956_07591
Gene type
protein coding
RefSeq status
MODEL
Organism
Nipponia nippon
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Pelecaniformes; Threskiornithidae; Nipponia
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
304
Annotation release Status Assembly Chr Location
100 current ASM70822v1 (GCF_000708225.1) Unplaced Scaffold NW_008999667.1 (6915730..7157819)

NW_008999667.1Genomic Context describing neighboring genes Neighboring gene SEC14 and spectrin domain containing 1 Neighboring gene coiled-coil domain containing 141 Neighboring gene pleckstrin homology domain containing A3 Neighboring gene FKBP prolyl isomerase 7

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_008999667.1 Unplaced Scaffold Reference ASM70822v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein kinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein phosphorylation IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
titin

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Nipponia nippon Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM70822v1 Primary Assembly

Genomic

  1. NW_008999667.1 Reference ASM70822v1 Primary Assembly

    Range
    6915730..7157819
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_009462382.1 → XP_009460657.1  titin

    Conserved Domains (16) summary
    cd00096
    Location:894 → 963
    Ig; Immunoglobulin domain
    cd05747
    Location:33013 → 33104
    Ig5_Titin_like; M5, fifth immunoglobulin (Ig)-like domain of human titin C terminus and similar proteins
    cd05748
    Location:20454 → 20528
    Ig_Titin_like; Immunoglobulin (Ig)-like domain of titin and similar proteins
    smart00408
    Location:4513 → 4579
    IGc2; Immunoglobulin C-2 Type
    smart00060
    Location:15953 → 16037
    FN3; Fibronectin type 3 domain
    smart00220
    Location:31709 → 31963
    S_TKc; Serine/Threonine protein kinases, catalytic domain
    smart00409
    Location:5069 → 5151
    IG; Immunoglobulin
    smart00410
    Location:20447 → 20528
    IG_like; Immunoglobulin like
    cd00063
    Location:24275 → 24365
    FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
    pfam07679
    Location:33422 → 33511
    I-set; Immunoglobulin I-set domain
    cd14104
    Location:31708 → 31984
    STKc_Titin; Catalytic domain of the Giant Serine/Threonine Kinase Titin
    pfam00047
    Location:12650 → 12730
    ig; Immunoglobulin domain
    pfam02389
    Location:11334 → 11446
    Cornifin; Cornifin (SPRR) family
    pfam02818
    Location:10051 → 10077
    PPAK; PPAK motif
    pfam13895
    Location:11717 → 11802
    Ig_2; Immunoglobulin domain
    cl11960
    Location:20165 → 20238
    Ig; Immunoglobulin domain
Nucleotide Protein
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