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GPSM1 G protein signaling modulator 1 [ Pygoscelis adeliae (Adelie penguin) ]

Gene ID: 103915250, updated on 3-Aug-2024

Summary

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Gene symbol
GPSM1
Gene description
G protein signaling modulator 1
Locus tag
AS28_01082
Gene type
protein coding
RefSeq status
MODEL
Organism
Pygoscelis adeliae
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Aequornithes; Sphenisciformes; Spheniscidae; Pygoscelis
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
14
Annotation release Status Assembly Chr Location
100 current ASM69910v1 (GCF_000699105.1) Unplaced Scaffold NW_008824587.1 (1117937..1176253)

NW_008824587.1Genomic Context describing neighboring genes Neighboring gene LIM homeobox 3 Neighboring gene quiescin sulfhydryl oxidase 2 Neighboring gene uncharacterized LOC103915251 Neighboring gene DNL-type zinc finger

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_008824587.1 Unplaced Scaffold Reference ASM69910v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables GTPase regulator activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
G-protein-signaling modulator 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Pygoscelis adeliae Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM69910v1 Primary Assembly

Genomic

  1. NW_008824587.1 Reference ASM69910v1 Primary Assembly

    Range
    1117937..1176253
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_009322035.1 → XP_009320310.1  G-protein-signaling modulator 1 isoform X1

    UniProtKB/TrEMBL
    A0A093NNQ4
    Conserved Domains (8) summary
    smart00028
    Location:239 → 271
    TPR; Tetratricopeptide repeats
    smart00390
    Location:581 → 601
    GoLoco; LGN motif, putative GEFs specific for G-alpha GTPases
    sd00006
    Location:279 → 306
    TPR; TPR repeat [structural motif]
    pfam00515
    Location:138 → 167
    TPR_1; Tetratricopeptide repeat
    pfam02188
    Location:526 → 547
    GoLoco; GoLoco motif
    pfam13176
    Location:320 → 354
    TPR_7; Tetratricopeptide repeat
    pfam13414
    Location:61 → 128
    TPR_11; TPR repeat
    pfam13424
    Location:239 → 310
    TPR_12; Tetratricopeptide repeat

  2. XM_009322036.1 → XP_009320311.1  G-protein-signaling modulator 1 isoform X2

    UniProtKB/TrEMBL
    A0A093NNQ4
    Conserved Domains (8) summary
    smart00028
    Location:192 → 224
    TPR; Tetratricopeptide repeats
    smart00390
    Location:474 → 494
    GoLoco; LGN motif, putative GEFs specific for G-alpha GTPases
    sd00006
    Location:232 → 259
    TPR; TPR repeat [structural motif]
    pfam00515
    Location:91 → 120
    TPR_1; Tetratricopeptide repeat
    pfam02188
    Location:419 → 440
    GoLoco; GoLoco motif
    pfam13176
    Location:273 → 307
    TPR_7; Tetratricopeptide repeat
    pfam13414
    Location:14 → 81
    TPR_11; TPR repeat
    pfam13424
    Location:192 → 263
    TPR_12; Tetratricopeptide repeat
Nucleotide Protein
Heading Accession and Version

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