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ASXL1 ASXL transcriptional regulator 1 [ Pygoscelis adeliae (Adelie penguin) ]

Gene ID: 103912474, updated on 3-Aug-2024

Summary

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Gene symbol
ASXL1
Gene description
ASXL transcriptional regulator 1
Locus tag
AS28_10637
Gene type
protein coding
RefSeq status
MODEL
Organism
Pygoscelis adeliae
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Aequornithes; Sphenisciformes; Spheniscidae; Pygoscelis
Orthologs
human mouse all
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Genomic context

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See ASXL1 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
11
Annotation release Status Assembly Chr Location
100 current ASM69910v1 (GCF_000699105.1) Unplaced Scaffold NW_008824289.1 (493821..506000, complement)

NW_008824289.1Genomic Context describing neighboring genes Neighboring gene COMM domain containing 7 Neighboring gene nucleolar protein 4 like Neighboring gene kinesin family member 3B Neighboring gene protein O-fucosyltransferase 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_008824289.1 Unplaced Scaffold Reference ASM69910v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables chromatin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables peroxisome proliferator activated receptor binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in animal organ morphogenesis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of PR-DUB complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
putative Polycomb group protein ASXL1
Names
Putative Polycomb group protein ASXL1
additional sex combs like 1, transcriptional regulator

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Pygoscelis adeliae Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM69910v1 Primary Assembly

Genomic

  1. NW_008824289.1 Reference ASM69910v1 Primary Assembly

    Range
    493821..506000 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_009318746.1 → XP_009317021.1  putative Polycomb group protein ASXL1

    Conserved Domains (3) summary
    pfam05066
    Location:1 → 54
    HARE-HTH; HB1, ASXL, restriction endonuclease HTH domain
    pfam13919
    Location:207 → 330
    ASXH; Asx homology domain
    pfam13922
    Location:1469 → 1512
    PHD_3; PHD domain of transcriptional enhancer, Asx
Nucleotide Protein
Heading Accession and Version

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