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SYTL4 synaptotagmin like 4 [ Aptenodytes forsteri (emperor penguin) ]

Gene ID: 103901275, updated on 3-Aug-2024

Summary

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Gene symbol
SYTL4
Gene description
synaptotagmin like 4
Locus tag
AS27_00747
Gene type
protein coding
RefSeq status
MODEL
Organism
Aptenodytes forsteri
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Aequornithes; Sphenisciformes; Spheniscidae; Aptenodytes
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
22
Annotation release Status Assembly Chr Location
101 current ASM69914v1 (GCF_000699145.1) Unplaced Scaffold NW_008795555.1 (429130..442540, complement)

NW_008795555.1Genomic Context describing neighboring genes Neighboring gene tetraspanin 6 Neighboring gene sushi repeat containing protein X-linked 2 Neighboring gene tRNA methyltransferase 12 homolog Neighboring gene cleavage stimulation factor subunit 2 Neighboring gene NADPH oxidase 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_008795555.1 Unplaced Scaffold Reference ASM69914v1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables neurexin family protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables phospholipid binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables small GTPase binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in exocytosis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in intracellular protein transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in exocytic vesicle IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
synaptotagmin-like protein 4

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Aptenodytes forsteri Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM69914v1

Genomic

  1. NW_008795555.1 Reference ASM69914v1

    Range
    429130..442540 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_019472811.1 → XP_019328356.1  synaptotagmin-like protein 4 isoform X2

  2. XM_009282124.1 → XP_009280399.1  synaptotagmin-like protein 4 isoform X1

    Conserved Domains (2) summary
    cd04020
    Location:381 → 546
    C2B_SLP_1-2-3-4; C2 domain second repeat present in Synaptotagmin-like proteins 1-4
    cd04029
    Location:243 → 367
    C2A_SLP-4_5; C2 domain first repeat present in Synaptotagmin-like proteins 4 and 5
Nucleotide Protein
Heading Accession and Version

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