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BAZ1A bromodomain adjacent to zinc finger domain 1A [ Serinus canaria (Common canary) ]

Gene ID: 103826937, updated on 12-Aug-2024

Summary

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Gene symbol
BAZ1A
Gene description
bromodomain adjacent to zinc finger domain 1A
See related
EnsemblRapid:ENSSCAG00000010530
Gene type
protein coding
RefSeq status
MODEL
Organism
Serinus canaria
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Passeroidea; Fringillidae; Carduelinae; Serinus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 5
Exon count:
29
Annotation release Status Assembly Chr Location
RS_2023_02 current serCan2020 (GCF_022539315.1) 5 NC_066319.1 (37060446..37126334, complement)

Chromosome 5 - NC_066319.1Genomic Context describing neighboring genes Neighboring gene sorting nexin 6 Neighboring gene cofilin 2 Neighboring gene uncharacterized LOC127059733 Neighboring gene uncharacterized LOC103826936

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_066319.1 Chromosome 5 Reference serCan2020 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in chromatin remodeling IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
bromodomain adjacent to zinc finger domain protein 1A

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_022539315.1-RS_2023_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference serCan2020 Primary Assembly

Genomic

  1. NC_066319.1 Reference serCan2020 Primary Assembly

    Range
    37060446..37126334 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_030239854.2 → XP_030095714.1  bromodomain adjacent to zinc finger domain protein 1A isoform X1

    UniProtKB/TrEMBL
    A0A8C9N8X2
    Conserved Domains (7) summary
    cd05504
    Location:1427 → 1541
    Bromo_Acf1_like; Bromodomain; Acf1_like or BAZ1A_like subfamily. Bromo adjacent to zinc finger 1A (BAZ1A) was identified as a novel human bromodomain gene by cDNA library screening. The Drosophila homologue, Acf1, is part of the CHRAC (chromatin accessibility complex) ...
    PTZ00121
    Location:636 → 777
    PTZ00121; MAEBL; Provisional
    cd15627
    Location:1155 → 1200
    PHD_BAZ1A; PHD finger found in bromodomain adjacent to zinc finger domain protein 1A (BAZ1A)
    pfam02791
    Location:424 → 484
    DDT; DDT domain
    pfam10537
    Location:24 → 122
    WAC_Acf1_DNA_bd; ATP-utilising chromatin assembly and remodelling N-terminal
    pfam15612
    Location:592 → 636
    WHIM1; WSTF, HB1, Itc1p, MBD9 motif 1
    pfam15613
    Location:801 → 931
    WSD; Williams-Beuren syndrome DDT (WSD), D-TOX E motif

  2. XM_030239853.2 → XP_030095713.1  bromodomain adjacent to zinc finger domain protein 1A isoform X1

    UniProtKB/TrEMBL
    A0A8C9N8X2
    Related
    ENSSCAP00000014462.2, ENSSCAT00000016221.2
    Conserved Domains (7) summary
    cd05504
    Location:1427 → 1541
    Bromo_Acf1_like; Bromodomain; Acf1_like or BAZ1A_like subfamily. Bromo adjacent to zinc finger 1A (BAZ1A) was identified as a novel human bromodomain gene by cDNA library screening. The Drosophila homologue, Acf1, is part of the CHRAC (chromatin accessibility complex) ...
    PTZ00121
    Location:636 → 777
    PTZ00121; MAEBL; Provisional
    cd15627
    Location:1155 → 1200
    PHD_BAZ1A; PHD finger found in bromodomain adjacent to zinc finger domain protein 1A (BAZ1A)
    pfam02791
    Location:424 → 484
    DDT; DDT domain
    pfam10537
    Location:24 → 122
    WAC_Acf1_DNA_bd; ATP-utilising chromatin assembly and remodelling N-terminal
    pfam15612
    Location:592 → 636
    WHIM1; WSTF, HB1, Itc1p, MBD9 motif 1
    pfam15613
    Location:801 → 931
    WSD; Williams-Beuren syndrome DDT (WSD), D-TOX E motif

  3. XM_050975870.1 → XP_050831827.1  bromodomain adjacent to zinc finger domain protein 1A isoform X1

    UniProtKB/TrEMBL
    A0A8C9N8X2

  4. XM_050975871.1 → XP_050831828.1  bromodomain adjacent to zinc finger domain protein 1A isoform X2

    UniProtKB/TrEMBL
    A0A8C9N8X2
Nucleotide Protein
Heading Accession and Version

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