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ARFGEF3 ARFGEF family member 3 [ Serinus canaria (Common canary) ]

Gene ID: 103818474, updated on 12-Aug-2024

Summary

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Gene symbol
ARFGEF3
Gene description
ARFGEF family member 3
See related
EnsemblRapid:ENSSCAG00000003112
Gene type
protein coding
RefSeq status
MODEL
Organism
Serinus canaria
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Passeroidea; Fringillidae; Carduelinae; Serinus
Orthologs
human mouse all
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Genomic context

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See ARFGEF3 in Genome Data Viewer
Location:
chromosome: 3
Exon count:
35
Annotation release Status Assembly Chr Location
RS_2023_02 current serCan2020 (GCF_022539315.1) 3 NC_066316.1 (50122823..50216640)

Chromosome 3 - NC_066316.1Genomic Context describing neighboring genes Neighboring gene p53 apoptosis effector related to PMP-22-like Neighboring gene p53 apoptosis effector related to PMP-22-like Neighboring gene small integral membrane protein 28 Neighboring gene NHS like 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_066316.1 Chromosome 3 Reference serCan2020 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables guanyl-nucleotide exchange factor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of ARF protein signal transduction IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
brefeldin A-inhibited guanine nucleotide-exchange protein 3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_022539315.1-RS_2023_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference serCan2020 Primary Assembly

Genomic

  1. NC_066316.1 Reference serCan2020 Primary Assembly

    Range
    50122823..50216640
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_050972538.1 → XP_050828495.1  brefeldin A-inhibited guanine nucleotide-exchange protein 3 isoform X1

    UniProtKB/TrEMBL
    A0A8C9MI70, A0A8C9U599
    Related
    ENSSCAP00000003755.1, ENSSCAT00000004368.2

  2. XM_009092799.4 → XP_009091047.1  brefeldin A-inhibited guanine nucleotide-exchange protein 3 isoform X2

    UniProtKB/TrEMBL
    A0A8C9MI70, A0A8C9MI99
    Related
    ENSSCAP00000003790.1, ENSSCAT00000004407.2
    Conserved Domains (3) summary
    smart00222
    Location:583 → 795
    Sec7; Sec7 domain
    PLN03076
    Location:5 → 167
    PLN03076; ARF guanine nucleotide exchange factor (ARF-GEF); Provisional
    pfam09324
    Location:1241 → 1308
    DUF1981; Domain of unknown function (DUF1981)

  3. XM_050972541.1 → XP_050828498.1  brefeldin A-inhibited guanine nucleotide-exchange protein 3 isoform X3

    UniProtKB/TrEMBL
    A0A8C9MI70

  4. XM_050972540.1 → XP_050828497.1  brefeldin A-inhibited guanine nucleotide-exchange protein 3 isoform X3

    UniProtKB/TrEMBL
    A0A8C9MI70

  5. XM_050972539.1 → XP_050828496.1  brefeldin A-inhibited guanine nucleotide-exchange protein 3 isoform X3

    UniProtKB/TrEMBL
    A0A8C9MI70
Nucleotide Protein
Heading Accession and Version

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