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IL16 interleukin 16 [ Acanthisitta chloris (rifleman) ]

Gene ID: 103809775, updated on 3-Aug-2024

Summary

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Gene symbol
IL16
Gene description
interleukin 16
Locus tag
N310_03807
Gene type
protein coding
RefSeq status
MODEL
Organism
Acanthisitta chloris
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Acanthisittidae; Acanthisitta
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
22
Annotation release Status Assembly Chr Location
100 current ASM69581v1 (GCF_000695815.1) Unplaced Scaffold NW_008692339.1 (7031..50469, complement)

NW_008692339.1Genomic Context describing neighboring genes Neighboring gene StAR related lipid transfer domain containing 5 Neighboring gene cilia and flagella associated protein 161 Neighboring gene talin rod domain containing 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_008692339.1 Unplaced Scaffold Reference ASM69581v1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables CD4 receptor binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables cytokine activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in induction of positive chemotaxis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in leukocyte chemotaxis IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
pro-interleukin-16
Names
Pro-interleukin-16

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Acanthisitta chloris Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM69581v1

Genomic

  1. NW_008692339.1 Reference ASM69581v1

    Range
    7031..50469 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_009082638.1 → XP_009080886.1  pro-interleukin-16

    Conserved Domains (2) summary
    smart00228
    Location:1355 → 1441
    PDZ; Domain present in PSD-95, Dlg, and ZO-1/2
    cd00992
    Location:344 → 426
    PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...
Nucleotide Protein
Heading Accession and Version

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