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LRRC3 leucine rich repeat containing 3 [ Acanthisitta chloris (rifleman) ]

Gene ID: 103809678, updated on 3-Aug-2024

Summary

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Gene symbol
LRRC3
Gene description
leucine rich repeat containing 3
Gene type
protein coding
RefSeq status
MODEL
Organism
Acanthisitta chloris
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Acanthisittidae; Acanthisitta
Orthologs
human mouse all
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Genomic context

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See LRRC3 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
1
Annotation release Status Assembly Chr Location
100 current ASM69581v1 (GCF_000695815.1) Unplaced Scaffold NW_008692129.1 (1297..2150)

NW_008692129.1Genomic Context describing neighboring genes Neighboring gene thrombospondin type laminin G domain and EAR repeats

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_008692129.1 Unplaced Scaffold Reference ASM69581v1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
LOW QUALITY PROTEIN: leucine-rich repeat-containing protein 3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Acanthisitta chloris Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM69581v1

Genomic

  1. NW_008692129.1 Reference ASM69581v1

    Range
    1297..2150
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_009082533.1 → XP_009080781.1  LOW QUALITY PROTEIN: leucine-rich repeat-containing protein 3

    Conserved Domains (5) summary
    smart00370
    Location:142 → 159
    LRR; Leucine-rich repeats, outliers
    smart00013
    Location:64 → 97
    LRRNT; Leucine rich repeat N-terminal domain
    cd00116
    Location:98 → 152
    LRR_RI; Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond ...
    sd00031
    Location:99 → 120
    LRR_1; leucine-rich repeat [structural motif]
    pfam13855
    Location:100 → 152
    LRR_8; Leucine rich repeat
Nucleotide Protein
Heading Accession and Version

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