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ATP13A3 ATPase 13A3 [ Manacus vitellinus (golden-collared manakin) ]

Gene ID: 103758278, updated on 3-Aug-2024

Summary

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Gene symbol
ATP13A3
Gene description
ATPase 13A3
Locus tag
N305_01925
See related
Ensembl:ENSMVIG00005004151
Gene type
protein coding
RefSeq status
MODEL
Organism
Manacus vitellinus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Pipridae; Manacus
Orthologs
human mouse all
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Genomic context

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See ATP13A3 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
35
Annotation release Status Assembly Chr Location
103 current ASM171598v3 (GCF_001715985.3) Unplaced Scaffold NW_021940207.1 (6108650..6167118, complement)
101 previous assembly ASM171598v1 (GCF_001715985.1) Unplaced Scaffold NW_017219951.1 (6208666..6267138, complement)

NW_021940207.1Genomic Context describing neighboring genes Neighboring gene carboxypeptidase N subunit 2 Neighboring gene leucine-rich repeat-containing protein 15-like Neighboring gene platelet glycoprotein V Neighboring gene large 60S subunit nuclear export GTPase 1 Neighboring gene xyloside xylosyltransferase 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ATP hydrolysis activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ATPase-coupled monoatomic cation transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables P-type ion transporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables polyamine transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in intracellular calcium ion homeostasis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in polyamine transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in late endosome membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
probable cation-transporting ATPase 13A3
Names
putative cation-transporting ATPase 13A3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Manacus vitellinus Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM171598v3

Genomic

  1. NW_021940207.1 Reference ASM171598v3

    Range
    6108650..6167118 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_018074923.1 → XP_017930412.1  probable cation-transporting ATPase 13A3 isoform X3

    Related
    ENSMVIP00005006422.1, ENSMVIT00005007350.1

  2. XM_018074922.2 → XP_017930411.1  probable cation-transporting ATPase 13A3 isoform X2

    Conserved Domains (1) summary
    TIGR01657
    Location:41 → 1171
    P-ATPase-V; P-type ATPase of unknown pump specificity (type V)

  3. XM_018074924.2 → XP_017930413.1  probable cation-transporting ATPase 13A3 isoform X4

  4. XM_018074921.2 → XP_017930410.1  probable cation-transporting ATPase 13A3 isoform X1

Nucleotide Protein
Heading Accession and Version

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