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Crebrf CREB3 regulatory factor [ Nannospalax galili (Upper Galilee mountains blind mole rat) ]

Gene ID: 103748197, updated on 11-Mar-2024

Summary

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Gene symbol
Crebrf
Gene description
CREB3 regulatory factor
Gene type
protein coding
RefSeq status
MODEL
Organism
Nannospalax galili
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Spalacidae; Spalacinae; Nannospalax
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
12
Annotation release Status Assembly Chr Location
102 current S.galili_v1.0 (GCF_000622305.1) Unplaced Scaffold NW_008353596.1 (3081038..3145598)

NW_008353596.1Genomic Context describing neighboring genes Neighboring gene ribosomal protein L26 like 1 Neighboring gene ATPase H+ transporting V0 subunit e1 Neighboring gene U6 spliceosomal RNA Neighboring gene BCL2 interacting protein 1 Neighboring gene NK2 homeobox 5

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_008353596 Unplaced Scaffold Reference S.galili_v1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Transcriptome sequencing of the blind subterranean mole rat, Spalax galili: utility and potential for the discovery of novel evolutionary patterns. Malik A, et al. PLoS One, 2011. PMID 21857902, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II transcription regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in response to unfolded protein IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
CREB3 regulatory factor

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Nannospalax galili Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference S.galili_v1.0 Primary Assembly

Genomic

  1. NW_008353596.1 Reference S.galili_v1.0 Primary Assembly

    Range
    3081038..3145598
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_008850773.3 → XP_008848995.1  CREB3 regulatory factor

    Conserved Domains (1) summary
    cd14809
    Location:525 → 563
    bZIP_AUREO-like; Basic leucine zipper (bZIP) domain of blue light (BL) receptor aureochrome (AUREO) and similar bZIP domains

  2. XM_029554862.1 → XP_029410722.1  CREB3 regulatory factor

    Conserved Domains (1) summary
    cd14809
    Location:525 → 563
    bZIP_AUREO-like; Basic leucine zipper (bZIP) domain of blue light (BL) receptor aureochrome (AUREO) and similar bZIP domains

  3. XM_029554864.1 → XP_029410724.1  CREB3 regulatory factor

    Conserved Domains (1) summary
    cd14809
    Location:525 → 563
    bZIP_AUREO-like; Basic leucine zipper (bZIP) domain of blue light (BL) receptor aureochrome (AUREO) and similar bZIP domains

  4. XM_029554865.1 → XP_029410725.1  CREB3 regulatory factor

    Conserved Domains (1) summary
    cd14809
    Location:525 → 563
    bZIP_AUREO-like; Basic leucine zipper (bZIP) domain of blue light (BL) receptor aureochrome (AUREO) and similar bZIP domains

  5. XM_029554867.1 → XP_029410727.1  CREB3 regulatory factor

    Conserved Domains (1) summary
    cd14809
    Location:525 → 563
    bZIP_AUREO-like; Basic leucine zipper (bZIP) domain of blue light (BL) receptor aureochrome (AUREO) and similar bZIP domains

  6. XM_029554863.1 → XP_029410723.1  CREB3 regulatory factor

    Conserved Domains (1) summary
    cd14809
    Location:525 → 563
    bZIP_AUREO-like; Basic leucine zipper (bZIP) domain of blue light (BL) receptor aureochrome (AUREO) and similar bZIP domains

  7. XM_029554866.1 → XP_029410726.1  CREB3 regulatory factor

    Conserved Domains (1) summary
    cd14809
    Location:525 → 563
    bZIP_AUREO-like; Basic leucine zipper (bZIP) domain of blue light (BL) receptor aureochrome (AUREO) and similar bZIP domains
Nucleotide Protein
Heading Accession and Version

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