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Dtnb dystrobrevin beta [ Nannospalax galili (Upper Galilee mountains blind mole rat) ]

Gene ID: 103746342, updated on 11-Mar-2024

Summary

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Gene symbol
Dtnb
Gene description
dystrobrevin beta
See related
Ensembl:ENSNGAG00000020485
Gene type
protein coding
RefSeq status
MODEL
Organism
Nannospalax galili
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Spalacidae; Spalacinae; Nannospalax
Orthologs
human mouse all
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Genomic context

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See Dtnb in Genome Data Viewer
Location:
chromosome: Un
Exon count:
20
Annotation release Status Assembly Chr Location
102 current S.galili_v1.0 (GCF_000622305.1) Unplaced Scaffold NW_008330570.1 (24105..328117)

NW_008330570.1Genomic Context describing neighboring genes Neighboring gene ETS translocation variant 5 pseudogene Neighboring gene alpha-2-macroglobulin receptor-associated protein pseudogene Neighboring gene U1 spliceosomal RNA Neighboring gene DNA methyltransferase 3 alpha Neighboring gene proopiomelanocortin

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_008330570 Unplaced Scaffold Reference S.galili_v1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Transcriptome sequencing of the blind subterranean mole rat, Spalax galili: utility and potential for the discovery of novel evolutionary patterns. Malik A, et al. PLoS One, 2011. PMID 21857902, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in synaptic signaling IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in synapse IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
dystrobrevin beta

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Nannospalax galili Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference S.galili_v1.0 Primary Assembly

Genomic

  1. NW_008330570.1 Reference S.galili_v1.0 Primary Assembly

    Range
    24105..328117
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_008848488.1 → XP_008846710.1  dystrobrevin beta isoform X2

    UniProtKB/TrEMBL
    A0A8C6WBC3
    Related
    ENSNGAP00000021247.1, ENSNGAT00000026924.1
    Conserved Domains (3) summary
    PRK12704
    Location:431 → 525
    PRK12704; phosphodiesterase; Provisional
    cd02334
    Location:241 → 289
    ZZ_dystrophin; Zinc finger, ZZ type. Zinc finger present in dystrophin and dystrobrevin. The ZZ motif coordinates two zinc ions and most likely participates in ligand binding or molecular scaffolding. Dystrophin attaches actin filaments to an integral membrane ...
    cd16244
    Location:54 → 214
    EFh_DTN; EF-hand-like motif found in dystrobrevins and similar proteins

  2. XM_008848520.2 → XP_008846742.1  dystrobrevin beta isoform X7

    Conserved Domains (3) summary
    PRK12704
    Location:431 → 525
    PRK12704; phosphodiesterase; Provisional
    cd02334
    Location:241 → 289
    ZZ_dystrophin; Zinc finger, ZZ type. Zinc finger present in dystrophin and dystrobrevin. The ZZ motif coordinates two zinc ions and most likely participates in ligand binding or molecular scaffolding. Dystrophin attaches actin filaments to an integral membrane ...
    cd16244
    Location:54 → 214
    EFh_DTN; EF-hand-like motif found in dystrobrevins and similar proteins

  3. XM_008848500.2 → XP_008846722.1  dystrobrevin beta isoform X4

    UniProtKB/TrEMBL
    A0A8C6RQ55
    Related
    ENSNGAP00000021248.1, ENSNGAT00000026925.1
    Conserved Domains (4) summary
    PRK00286
    Location:346 → 526
    xseA; exodeoxyribonuclease VII large subunit; Reviewed
    PRK05431
    Location:440 → 510
    PRK05431; seryl-tRNA synthetase; Provisional
    cd02334
    Location:241 → 289
    ZZ_dystrophin; Zinc finger, ZZ type. Zinc finger present in dystrophin and dystrobrevin. The ZZ motif coordinates two zinc ions and most likely participates in ligand binding or molecular scaffolding. Dystrophin attaches actin filaments to an integral membrane ...
    cd16244
    Location:54 → 214
    EFh_DTN; EF-hand-like motif found in dystrobrevins and similar proteins

  4. XM_029553775.1 → XP_029409635.1  dystrobrevin beta isoform X10

    Conserved Domains (3) summary
    PRK00286
    Location:346 → 526
    xseA; exodeoxyribonuclease VII large subunit; Reviewed
    cd02334
    Location:241 → 289
    ZZ_dystrophin; Zinc finger, ZZ type. Zinc finger present in dystrophin and dystrobrevin. The ZZ motif coordinates two zinc ions and most likely participates in ligand binding or molecular scaffolding. Dystrophin attaches actin filaments to an integral membrane ...
    cd16244
    Location:54 → 214
    EFh_DTN; EF-hand-like motif found in dystrobrevins and similar proteins

  5. XM_008848542.2 → XP_008846764.1  dystrobrevin beta isoform X6

    Conserved Domains (3) summary
    PRK12704
    Location:401 → 495
    PRK12704; phosphodiesterase; Provisional
    cd02334
    Location:241 → 289
    ZZ_dystrophin; Zinc finger, ZZ type. Zinc finger present in dystrophin and dystrobrevin. The ZZ motif coordinates two zinc ions and most likely participates in ligand binding or molecular scaffolding. Dystrophin attaches actin filaments to an integral membrane ...
    cd16244
    Location:54 → 214
    EFh_DTN; EF-hand-like motif found in dystrobrevins and similar proteins

  6. XM_029553777.1 → XP_029409637.1  dystrobrevin beta isoform X11

    Conserved Domains (3) summary
    PRK12704
    Location:401 → 495
    PRK12704; phosphodiesterase; Provisional
    cd02334
    Location:241 → 289
    ZZ_dystrophin; Zinc finger, ZZ type. Zinc finger present in dystrophin and dystrobrevin. The ZZ motif coordinates two zinc ions and most likely participates in ligand binding or molecular scaffolding. Dystrophin attaches actin filaments to an integral membrane ...
    cd16244
    Location:54 → 214
    EFh_DTN; EF-hand-like motif found in dystrobrevins and similar proteins

  7. XM_008848548.2 → XP_008846770.1  dystrobrevin beta isoform X9

    Conserved Domains (3) summary
    PRK05431
    Location:410 → 480
    PRK05431; seryl-tRNA synthetase; Provisional
    cd02334
    Location:241 → 289
    ZZ_dystrophin; Zinc finger, ZZ type. Zinc finger present in dystrophin and dystrobrevin. The ZZ motif coordinates two zinc ions and most likely participates in ligand binding or molecular scaffolding. Dystrophin attaches actin filaments to an integral membrane ...
    cd16244
    Location:54 → 214
    EFh_DTN; EF-hand-like motif found in dystrobrevins and similar proteins

  8. XM_029553759.1 → XP_029409619.1  dystrobrevin beta isoform X1

    Conserved Domains (3) summary
    PRK12704
    Location:431 → 525
    PRK12704; phosphodiesterase; Provisional
    cd02334
    Location:241 → 289
    ZZ_dystrophin; Zinc finger, ZZ type. Zinc finger present in dystrophin and dystrobrevin. The ZZ motif coordinates two zinc ions and most likely participates in ligand binding or molecular scaffolding. Dystrophin attaches actin filaments to an integral membrane ...
    cd16244
    Location:54 → 214
    EFh_DTN; EF-hand-like motif found in dystrobrevins and similar proteins

  9. XM_029553766.1 → XP_029409626.1  dystrobrevin beta isoform X3

    Conserved Domains (4) summary
    PRK00286
    Location:346 → 526
    xseA; exodeoxyribonuclease VII large subunit; Reviewed
    PRK05431
    Location:440 → 510
    PRK05431; seryl-tRNA synthetase; Provisional
    cd02334
    Location:241 → 289
    ZZ_dystrophin; Zinc finger, ZZ type. Zinc finger present in dystrophin and dystrobrevin. The ZZ motif coordinates two zinc ions and most likely participates in ligand binding or molecular scaffolding. Dystrophin attaches actin filaments to an integral membrane ...
    cd16244
    Location:54 → 214
    EFh_DTN; EF-hand-like motif found in dystrobrevins and similar proteins

  10. XM_029553768.1 → XP_029409628.1  dystrobrevin beta isoform X5

    Conserved Domains (3) summary
    PRK12704
    Location:401 → 495
    PRK12704; phosphodiesterase; Provisional
    cd02334
    Location:241 → 289
    ZZ_dystrophin; Zinc finger, ZZ type. Zinc finger present in dystrophin and dystrobrevin. The ZZ motif coordinates two zinc ions and most likely participates in ligand binding or molecular scaffolding. Dystrophin attaches actin filaments to an integral membrane ...
    cd16244
    Location:54 → 214
    EFh_DTN; EF-hand-like motif found in dystrobrevins and similar proteins

  11. XM_029553769.1 → XP_029409629.1  dystrobrevin beta isoform X8

    Conserved Domains (3) summary
    PRK05431
    Location:410 → 480
    PRK05431; seryl-tRNA synthetase; Provisional
    cd02334
    Location:241 → 289
    ZZ_dystrophin; Zinc finger, ZZ type. Zinc finger present in dystrophin and dystrobrevin. The ZZ motif coordinates two zinc ions and most likely participates in ligand binding or molecular scaffolding. Dystrophin attaches actin filaments to an integral membrane ...
    cd16244
    Location:54 → 214
    EFh_DTN; EF-hand-like motif found in dystrobrevins and similar proteins
Nucleotide Protein
Heading Accession and Version

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