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Mars1 methionyl-tRNA synthetase 1 [ Nannospalax galili (Upper Galilee mountains blind mole rat) ]

Gene ID: 103742912, updated on 11-Mar-2024

Summary

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Gene symbol
Mars1
Gene description
methionyl-tRNA synthetase 1
See related
Ensembl:ENSNGAG00000018824
Gene type
protein coding
RefSeq status
MODEL
Organism
Nannospalax galili
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Spalacidae; Spalacinae; Nannospalax
Also known as
Mars
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
22
Annotation release Status Assembly Chr Location
102 current S.galili_v1.0 (GCF_000622305.1) Unplaced Scaffold NW_008347519.1 (499018..522057, complement)

NW_008347519.1Genomic Context describing neighboring genes Neighboring gene dynactin subunit 2 Neighboring gene methyl-CpG binding domain protein 6 Neighboring gene DNA damage inducible transcript 3 Neighboring gene Rho GTPase activating protein 9 Neighboring gene GLI family zinc finger 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_008347519 Unplaced Scaffold Reference S.galili_v1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Transcriptome sequencing of the blind subterranean mole rat, Spalax galili: utility and potential for the discovery of novel evolutionary patterns. Malik A, et al. PLoS One, 2011. PMID 21857902, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables methionine-tRNA ligase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in methionyl-tRNA aminoacylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of aminoacyl-tRNA synthetase multienzyme complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
methionine--tRNA ligase, cytoplasmic

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Nannospalax galili Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference S.galili_v1.0 Primary Assembly

Genomic

  1. NW_008347519.1 Reference S.galili_v1.0 Primary Assembly

    Range
    499018..522057 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_008844073.3 → XP_008842295.1  methionine--tRNA ligase, cytoplasmic isoform X1

    Conserved Domains (4) summary
    cd10307
    Location:77 → 179
    GST_C_MetRS_N; Glutathione S-transferase C-terminal-like, alpha helical domain of Methionyl-tRNA synthetase from higher eukaryotes
    PLN02610
    Location:253 → 839
    PLN02610; probable methionyl-tRNA synthetase
    cd00939
    Location:855 → 899
    MetRS_RNA; MetRS_RNA binding domain. This short RNA-binding domain is found at the C-terminus of MetRS in several higher eukaryote aminoacyl-tRNA synthetases (aaRSs). It is repeated in Drosophila MetRS. This domain consists of a helix-turn-helix structure, which is ...
    pfam18485
    Location:1 → 74
    GST_N_5; Glutathione S-transferase, N-terminal domain

  2. XM_008844074.2 → XP_008842296.1  methionine--tRNA ligase, cytoplasmic isoform X2

    UniProtKB/TrEMBL
    A0A8C6RI19
    Related
    ENSNGAP00000018813.1, ENSNGAT00000024468.1
    Conserved Domains (3) summary
    cd10307
    Location:77 → 179
    GST_C_MetRS_N; Glutathione S-transferase C-terminal-like, alpha helical domain of Methionyl-tRNA synthetase from higher eukaryotes
    PLN02610
    Location:253 → 878
    PLN02610; probable methionyl-tRNA synthetase
    pfam18485
    Location:1 → 74
    GST_N_5; Glutathione S-transferase, N-terminal domain
Nucleotide Protein
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