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Plppr4 phospholipid phosphatase related 4 [ Nannospalax galili (Upper Galilee mountains blind mole rat) ]

Gene ID: 103734648, updated on 11-Mar-2024

Summary

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Gene symbol
Plppr4
Gene description
phospholipid phosphatase related 4
See related
Ensembl:ENSNGAG00000017030
Gene type
protein coding
RefSeq status
MODEL
Organism
Nannospalax galili
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Spalacidae; Spalacinae; Nannospalax
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
7
Annotation release Status Assembly Chr Location
102 current S.galili_v1.0 (GCF_000622305.1) Unplaced Scaffold NW_008338999.1 (5591683..5638858)

NW_008338999.1Genomic Context describing neighboring genes Neighboring gene 60S ribosomal protein L30 pseudogene Neighboring gene phospholipid phosphatase related 5 Neighboring gene EF-hand domain-containing family member C2-like Neighboring gene centrin-3-like Neighboring gene uncharacterized LOC108490876

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_008338999 Unplaced Scaffold Reference S.galili_v1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Transcriptome sequencing of the blind subterranean mole rat, Spalax galili: utility and potential for the discovery of novel evolutionary patterns. Malik A, et al. PLoS One, 2011. PMID 21857902, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables phosphatidate phosphatase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in axonogenesis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in phospholipid dephosphorylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in phospholipid metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in signal transduction IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
phospholipid phosphatase-related protein type 4

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Nannospalax galili Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference S.galili_v1.0 Primary Assembly

Genomic

  1. NW_008338999.1 Reference S.galili_v1.0 Primary Assembly

    Range
    5591683..5638858
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_008833688.3 → XP_008831910.1  phospholipid phosphatase-related protein type 4

    UniProtKB/TrEMBL
    A0A8C6RDM6
    Related
    ENSNGAP00000016234.1, ENSNGAT00000021849.1
    Conserved Domains (2) summary
    TIGR01456
    Location:333 → 447
    CECR5; HAD-superfamily class IIA hydrolase, TIGR01456, CECR5
    cd03384
    Location:174 → 323
    PAP2_wunen; PAP2, wunen subfamily. Most likely a family of membrane associated phosphatidic acid phosphatases. Wunen is a drosophila protein expressed in the central nervous system, which provides repellent activity towards primordial germ cells (PGCs), controls the ...
Nucleotide Protein
Heading Accession and Version

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