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Znhit1 zinc finger HIT-type containing 1 [ Nannospalax galili (Upper Galilee mountains blind mole rat) ]

Gene ID: 103733493, updated on 11-Mar-2024

Summary

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Gene symbol
Znhit1
Gene description
zinc finger HIT-type containing 1
See related
Ensembl:ENSNGAG00000023520
Gene type
protein coding
RefSeq status
MODEL
Organism
Nannospalax galili
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Spalacidae; Spalacinae; Nannospalax
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
6
Annotation release Status Assembly Chr Location
102 current S.galili_v1.0 (GCF_000622305.1) Unplaced Scaffold NW_008337205.1 (1425575..1434916, complement)

NW_008337205.1Genomic Context describing neighboring genes Neighboring gene fission, mitochondrial 1 Neighboring gene claudin 15 Neighboring gene procollagen-lysine,2-oxoglutarate 5-dioxygenase 3 Neighboring gene monoacylglycerol O-acyltransferase 3 Neighboring gene uncharacterized LOC103733494

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_008337205 Unplaced Scaffold Reference S.galili_v1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Transcriptome sequencing of the blind subterranean mole rat, Spalax galili: utility and potential for the discovery of novel evolutionary patterns. Malik A, et al. PLoS One, 2011. PMID 21857902, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables nucleosome binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in chromatin remodeling IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of Swr1 complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
zinc finger HIT domain-containing protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Nannospalax galili Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference S.galili_v1.0 Primary Assembly

Genomic

  1. NW_008337205.1 Reference S.galili_v1.0 Primary Assembly

    Range
    1425575..1434916 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_008832309.3 → XP_008830531.1  zinc finger HIT domain-containing protein 1 isoform X2

    UniProtKB/TrEMBL
    A0A8C6WDF4
    Related
    ENSNGAP00000025627.1, ENSNGAT00000031348.1
    Conserved Domains (2) summary
    pfam04438
    Location:112 → 139
    zf-HIT; HIT zinc finger
    cl02154
    Location:71 → 134
    YL1_C; YL1 nuclear protein C-terminal domain

  2. XM_008832308.3 → XP_008830530.1  zinc finger HIT domain-containing protein 1 isoform X1

    UniProtKB/TrEMBL
    A0A8C6S029
    Related
    ENSNGAP00000025628.1, ENSNGAT00000031349.1
    Conserved Domains (2) summary
    pfam04438
    Location:113 → 140
    zf-HIT; HIT zinc finger
    cl02154
    Location:72 → 135
    YL1_C; YL1 nuclear protein C-terminal domain
Nucleotide Protein
Heading Accession and Version

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