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Lmo4 LIM domain only 4 [ Nannospalax galili (Upper Galilee mountains blind mole rat) ]

Gene ID: 103730110, updated on 11-Mar-2024

Summary

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Gene symbol
Lmo4
Gene description
LIM domain only 4
See related
Ensembl:ENSNGAG00000012856
Gene type
protein coding
RefSeq status
MODEL
Organism
Nannospalax galili
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Spalacidae; Spalacinae; Nannospalax
Orthologs
human mouse all
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Genomic context

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See Lmo4 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
6
Annotation release Status Assembly Chr Location
102 current S.galili_v1.0 (GCF_000622305.1) Unplaced Scaffold NW_008333469.1 (1962131..1981710, complement)

NW_008333469.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC115069473 Neighboring gene small nucleolar RNA SNORA4 Neighboring gene U6 spliceosomal RNA Neighboring gene phosphatidylinositol N-acetylglucosaminyltransferase subunit P-like Neighboring gene heparan sulfate 2-O-sulfotransferase 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_008333469 Unplaced Scaffold Reference S.galili_v1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Transcriptome sequencing of the blind subterranean mole rat, Spalax galili: utility and potential for the discovery of novel evolutionary patterns. Malik A, et al. PLoS One, 2011. PMID 21857902, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
LIM domain transcription factor LMO4

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Nannospalax galili Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference S.galili_v1.0 Primary Assembly

Genomic

  1. NW_008333469.1 Reference S.galili_v1.0 Primary Assembly

    Range
    1962131..1981710 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_008828294.2 → XP_008826516.1  LIM domain transcription factor LMO4

    See identical proteins and their annotated locations for XP_008826516.1

    UniProtKB/TrEMBL
    A0A8C6R122
    Related
    ENSNGAP00000010424.1, ENSNGAT00000015956.1
    Conserved Domains (2) summary
    cd09386
    Location:23 → 77
    LIM1_LMO4; The first LIM domain of LMO4 (LIM domain only protein 4)
    cd09387
    Location:87 → 141
    LIM2_LMO4; The second LIM domain of LMO4 (LIM domain only protein 4)

  2. XM_008828295.1 → XP_008826517.1  LIM domain transcription factor LMO4

    See identical proteins and their annotated locations for XP_008826517.1

    UniProtKB/TrEMBL
    A0A8C6R122
    Conserved Domains (2) summary
    cd09386
    Location:23 → 77
    LIM1_LMO4; The first LIM domain of LMO4 (LIM domain only protein 4)
    cd09387
    Location:87 → 141
    LIM2_LMO4; The second LIM domain of LMO4 (LIM domain only protein 4)
Nucleotide Protein
Heading Accession and Version

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