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SCARF2 scavenger receptor class F member 2 [ Ursus maritimus (polar bear) ]

Gene ID: 103669300, updated on 11-Mar-2024

Summary

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Gene symbol
SCARF2
Gene description
scavenger receptor class F member 2
Gene type
protein coding
RefSeq status
MODEL
Organism
Ursus maritimus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Ursidae; Ursus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
12
Annotation release Status Assembly Chr Location
101 current ASM1731132v1 (GCF_017311325.1) Unplaced Scaffold NW_024425897.1 (2450351..2464171)
100 previous assembly UrsMar_1.0 (GCF_000687225.1) Unplaced Scaffold NW_007907161.1 (2393015..2395902)

NW_024425897.1Genomic Context describing neighboring genes Neighboring gene mediator complex subunit 15 Neighboring gene kelch like family member 22 Neighboring gene zinc finger protein 74 Neighboring gene zinc finger protein 883-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables scavenger receptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
scavenger receptor class F member 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Ursus maritimus Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1731132v1 Primary Assembly

Genomic

  1. NW_024425897.1 Reference ASM1731132v1 Primary Assembly

    Range
    2450351..2464171
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_040619562.1 → XP_040475496.1  scavenger receptor class F member 2 isoform X1

    UniProtKB/TrEMBL
    A0A8M1EXI0
    Conserved Domains (3) summary
    PHA03247
    Location:670 → 869
    PHA03247; large tegument protein UL36; Provisional
    PRK07764
    Location:565 → 749
    PRK07764; DNA polymerase III subunits gamma and tau; Validated
    NF033759
    Location:180 → 402
    exchanger_TraA; outer membrane exchange protein TraA

  2. XM_040619563.1 → XP_040475497.1  scavenger receptor class F member 2 isoform X2

    UniProtKB/TrEMBL
    A0A8M1F100
    Conserved Domains (3) summary
    PHA03247
    Location:665 → 864
    PHA03247; large tegument protein UL36; Provisional
    NF033759
    Location:180 → 402
    exchanger_TraA; outer membrane exchange protein TraA
    NF033913
    Location:528 → 617
    fibronec_FbpA; LPXTG-anchored fibronectin-binding protein FbpA

  3. XM_040619564.1 → XP_040475498.1  scavenger receptor class F member 2 isoform X3

    UniProtKB/TrEMBL
    A0A8M1EX26
    Conserved Domains (3) summary
    PHA03247
    Location:647 → 846
    PHA03247; large tegument protein UL36; Provisional
    PRK07764
    Location:542 → 726
    PRK07764; DNA polymerase III subunits gamma and tau; Validated
    NF033759
    Location:58 → 415
    exchanger_TraA; outer membrane exchange protein TraA
Nucleotide Protein
Heading Accession and Version

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