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UBR3 ubiquitin protein ligase E3 component n-recognin 3 [ Corvus brachyrhynchos (American crow) ]

Gene ID: 103616576, updated on 3-Aug-2024

Summary

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Gene symbol
UBR3
Gene description
ubiquitin protein ligase E3 component n-recognin 3
Locus tag
N302_06775
Gene type
protein coding
RefSeq status
MODEL
Organism
Corvus brachyrhynchos
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Corvoidea; Corvidae; Corvus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
39
Annotation release Status Assembly Chr Location
101 current ASM69197v1 (GCF_000691975.1) Unplaced Scaffold NW_008238358.1 (7203275..7299050, complement)

NW_008238358.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC108447036 Neighboring gene myosin IIIB Neighboring gene methyltransferase 5, N6-adenosine Neighboring gene kelch like family member 23 Neighboring gene small RNA binding exonuclease protection factor La

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_008238358.1 Unplaced Scaffold Reference ASM69197v1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ubiquitin protein ligase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein ubiquitination IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in ubiquitin-dependent protein catabolic process via the N-end rule pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of ubiquitin ligase complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
E3 ubiquitin-protein ligase UBR3
Names
ubiquitin protein ligase E3 component n-recognin 3 (putative)

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Corvus brachyrhynchos Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM69197v1

Genomic

  1. NW_008238358.1 Reference ASM69197v1

    Range
    7203275..7299050 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_017735619.1 → XP_017591108.1  E3 ubiquitin-protein ligase UBR3 isoform X4

    UniProtKB/TrEMBL
    A0A091ESL3
    Conserved Domains (1) summary
    pfam15811
    Location:1015 → 1045
    SVIP; Small VCP/p97-interacting protein

  2. XM_008634774.2 → XP_008632996.2  E3 ubiquitin-protein ligase UBR3 isoform X3

    UniProtKB/TrEMBL
    A0A091ESL3
    Conserved Domains (1) summary
    pfam15811
    Location:1015 → 1045
    SVIP; Small VCP/p97-interacting protein

  3. XM_017735618.1 → XP_017591107.1  E3 ubiquitin-protein ligase UBR3 isoform X2

    UniProtKB/TrEMBL
    A0A091ESL3

  4. XM_017735617.1 → XP_017591106.1  E3 ubiquitin-protein ligase UBR3 isoform X1

    UniProtKB/TrEMBL
    A0A091ESL3

  5. XM_017735620.1 → XP_017591109.1  E3 ubiquitin-protein ligase UBR3 isoform X5

    UniProtKB/TrEMBL
    A0A091ESL3

RNA

  1. XR_001862386.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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