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PHF11 PHD finger protein 11 [ Corvus brachyrhynchos (American crow) ]

Gene ID: 103615164, updated on 3-Aug-2024

Summary

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Gene symbol
PHF11
Gene description
PHD finger protein 11
Locus tag
N302_05087
Gene type
protein coding
RefSeq status
MODEL
Organism
Corvus brachyrhynchos
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Corvoidea; Corvidae; Corvus
Orthologs
human all
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Genomic context

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Location:
chromosome: Un
Exon count:
16
Annotation release Status Assembly Chr Location
101 current ASM69197v1 (GCF_000691975.1) Unplaced Scaffold NW_008238132.1 (6967605..6993149)

NW_008238132.1Genomic Context describing neighboring genes Neighboring gene RCC1 and BTB domain-containing protein 2 Neighboring gene calcium binding protein 39 like Neighboring gene histone-lysine N-methyltransferase SETDB2 Neighboring gene uncharacterized LOC108446603 Neighboring gene ADP ribosylation factor like GTPase 11

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_008238132.1 Unplaced Scaffold Reference ASM69197v1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables histone binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables histone deacetylase binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
PHD finger protein 11

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Corvus brachyrhynchos Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM69197v1

Genomic

  1. NW_008238132.1 Reference ASM69197v1

    Range
    6967605..6993149
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_017733626.1 → XP_017589115.1  PHD finger protein 11 isoform X5

    Conserved Domains (1) summary
    cl22851
    Location:69 → 183
    PHD_SF; PHD finger superfamily

  2. XM_017733627.1 → XP_017589116.1  PHD finger protein 11 isoform X7

  3. XM_017733629.1 → XP_017589118.1  PHD finger protein 11 isoform X8

    Conserved Domains (1) summary
    cl22851
    Location:9 → 123
    PHD_SF; PHD finger superfamily

  4. XM_017733632.1 → XP_017589121.1  PHD finger protein 11 isoform X8

    Conserved Domains (1) summary
    cl22851
    Location:9 → 123
    PHD_SF; PHD finger superfamily

  5. XM_017733625.1 → XP_017589114.1  PHD finger protein 11 isoform X4

    Conserved Domains (1) summary
    cl22851
    Location:82 → 196
    PHD_SF; PHD finger superfamily

  6. XM_008633182.2 → XP_008631404.2  PHD finger protein 11 isoform X6

    Conserved Domains (1) summary
    cl22851
    Location:37 → 151
    PHD_SF; PHD finger superfamily

  7. XM_017733628.1 → XP_017589117.1  PHD finger protein 11 isoform X8

    Conserved Domains (1) summary
    cl22851
    Location:9 → 123
    PHD_SF; PHD finger superfamily

  8. XM_017733633.1 → XP_017589122.1  PHD finger protein 11 isoform X8

    Conserved Domains (1) summary
    cl22851
    Location:9 → 123
    PHD_SF; PHD finger superfamily

  9. XM_017733631.1 → XP_017589120.1  PHD finger protein 11 isoform X8

    Conserved Domains (1) summary
    cl22851
    Location:9 → 123
    PHD_SF; PHD finger superfamily

  10. XM_017733630.1 → XP_017589119.1  PHD finger protein 11 isoform X8

    Conserved Domains (1) summary
    cl22851
    Location:9 → 123
    PHD_SF; PHD finger superfamily

  11. XM_017733622.1 → XP_017589111.1  PHD finger protein 11 isoform X1

  12. XM_017733623.1 → XP_017589112.1  PHD finger protein 11 isoform X2

  13. XM_017733624.1 → XP_017589113.1  PHD finger protein 11 isoform X3

Nucleotide Protein
Heading Accession and Version

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