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SRR serine racemase [ Galeopterus variegatus (Sunda flying lemur) ]

Gene ID: 103584746, updated on 11-Mar-2024

Summary

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Gene symbol
SRR
Gene description
serine racemase
Gene type
protein coding
RefSeq status
MODEL
Organism
Galeopterus variegatus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Dermoptera; Cynocephalidae; Galeopterus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
11
Annotation release Status Assembly Chr Location
100 current G_variegatus-3.0.2 (GCF_000696425.1) Unplaced Scaffold NW_007726312.1 (116614..130911, complement)

NW_007726312.1Genomic Context describing neighboring genes Neighboring gene MAX network transcriptional repressor Neighboring gene small G protein signaling modulator 2 Neighboring gene TSR1 ribosome maturation factor Neighboring gene SMG6 nonsense mediated mRNA decay factor Neighboring gene 60S ribosomal protein L14 pseudogene Neighboring gene HIC ZBTB transcriptional repressor 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_007726312 unplaced scaffold reference G_variegatus-3.0.2 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables L-serine ammonia-lyase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables magnesium ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables pyridoxal phosphate binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables serine racemase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables threonine racemase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in D-serine biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in L-serine metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in pyruvate biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
serine racemase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Galeopterus variegatus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference G_variegatus-3.0.2 Primary Assembly

Genomic

  1. NW_007726312.1 Reference G_variegatus-3.0.2 Primary Assembly

    Range
    116614..130911 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_008565633.1 → XP_008563855.1  serine racemase

    See identical proteins and their annotated locations for XP_008563855.1

    Conserved Domains (2) summary
    COG1171
    Location:1 → 322
    IlvA; Threonine dehydratase [Amino acid transport and metabolism]
    cl00342
    Location:1 → 322
    Trp-synth-beta_II; Tryptophan synthase beta superfamily (fold type II); this family of pyridoxal phosphate (PLP)-dependent enzymes catalyzes beta-replacement and beta-elimination reactions. This CD corresponds to aminocyclopropane-1-carboxylate deaminase (ACCD), tryptophan ...

  2. XM_008565640.1 → XP_008563862.1  serine racemase

    See identical proteins and their annotated locations for XP_008563862.1

    Conserved Domains (2) summary
    COG1171
    Location:1 → 322
    IlvA; Threonine dehydratase [Amino acid transport and metabolism]
    cl00342
    Location:1 → 322
    Trp-synth-beta_II; Tryptophan synthase beta superfamily (fold type II); this family of pyridoxal phosphate (PLP)-dependent enzymes catalyzes beta-replacement and beta-elimination reactions. This CD corresponds to aminocyclopropane-1-carboxylate deaminase (ACCD), tryptophan ...

  3. XM_008565634.1 → XP_008563856.1  serine racemase

    See identical proteins and their annotated locations for XP_008563856.1

    Conserved Domains (2) summary
    COG1171
    Location:1 → 322
    IlvA; Threonine dehydratase [Amino acid transport and metabolism]
    cl00342
    Location:1 → 322
    Trp-synth-beta_II; Tryptophan synthase beta superfamily (fold type II); this family of pyridoxal phosphate (PLP)-dependent enzymes catalyzes beta-replacement and beta-elimination reactions. This CD corresponds to aminocyclopropane-1-carboxylate deaminase (ACCD), tryptophan ...
Nucleotide Protein
Heading Accession and Version

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